Gene PC1_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3710 
Symbol 
ID8134690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4188888 
End bp4189622 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID644867010 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_003019261 
Protein GI253690071 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0165394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTAC CACGCATTTT TCATCCCGAT ACGCTCCCCC TTAACGGCGG TGAAGTCGAA 
CTGAGCGACG ATGCTGCCAA CCATGTTGGT CGCGTGTTAC GCATGAATAC GGGCCAGGCA
TTGCAGTTGT TTGATGGCAG CAATCATGTC TTTGATGCGG AAATCATCGC GGCAGGCAAA
AAGAGTGTGC GCGTTCACTT CACAGCAGGT AAGTTGGAAA ATAAAGAATC GCCCCTACAT
TTACATCTGG GACAGGTGAT GTCGCGCGGC GAAAAGATGG AATTTACTAT CCAGAAATCC
ATCGAGCTGG GCGTCAATGT GATTACCCCG CTGCTTTCTG AACGCTGTGG CGTAAAACTG
GATGCCGAGC GTATGGAGAA AAAAATTAAC CAGTGGCAGA AAATCGCGAT TGCCGCCTGT
GAACAGTCAG GCCGCAACTG TGTGCCGCTG GTACGGCCAG CGATGACGCT GGAAGCCTGG
TGTGCGGAAC AAGACAGTGC ATTGAAATTA AATCTGCACC CGCGCGCCAC ACAGAGCATT
AATACGCTGC CGCTGCCAGT CGATCGGGTC AGGCTGCTAA TCGGCCCGGA AGGCGGACTG
ACCGCCAGTG AAATTACCAT GACCTCAGAA CACGGATTCA CTGATATCCT GTTGGGGCCA
CGCGTTTTGC GCACAGAAAC CACTGCACTC ACCGCCATGA CCGCCTTACA GGTACGTTTC
GGCGATTTGG GGTAA
 
Protein sequence
MRVPRIFHPD TLPLNGGEVE LSDDAANHVG RVLRMNTGQA LQLFDGSNHV FDAEIIAAGK 
KSVRVHFTAG KLENKESPLH LHLGQVMSRG EKMEFTIQKS IELGVNVITP LLSERCGVKL
DAERMEKKIN QWQKIAIAAC EQSGRNCVPL VRPAMTLEAW CAEQDSALKL NLHPRATQSI
NTLPLPVDRV RLLIGPEGGL TASEITMTSE HGFTDILLGP RVLRTETTAL TAMTALQVRF
GDLG