Gene PC1_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3700 
Symbol 
ID8134680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4175149 
End bp4176225 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content51% 
IMG OID644867000 
Productfructose-bisphosphate aldolase 
Protein accessionYP_003019251 
Protein GI253690061 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01520] fructose-bisphosphate aldolase, class II, yeast/E. coli subtype 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.239509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA TTTTTGATTT CGTAAAACCC GGTGTCATCA CTGGTGATGA CGTTCAGAAA 
GTTTTCGCAG TAGCAAAAGA AAACCAATTC GCTTTGCCAG CAGTGAACTG TGTCGGTACC 
GACTCAATCA ATGCTGTGCT GGAAGCCGCA GCCAAAGTAC GTGCGCCGGT CATCGTTCAG 
TTCTCTAACG GCGGTGCAGC ATTCATCGCG GGTAAAGGCC TGAAAGCAGA AGGTCAGCAG 
GCGGCAATTT TGGGAGCGAT TTCTGGCGCT CATCATGTGC ATCAAATGGC AGAACACTAT 
GGTGTGCCAG TCATTCTGCA CACCGACCAC TGCGCGAAGA AATTGCTGCC GTGGATCGAT 
GGCCTGCTGG ACGCGGGTGA AAAACACTTT GCTGCTACTG GCAAACCGCT GTTCTCTTCT 
CACATGATTG ACCTGTCTGA AGAGTCGCTG GAAGAGAATA TCGAGATCTG TTCTAAGTAT 
TTGGCTCGTA TGGCCAAAAT CGATATGACT CTGGAAATCG AATTGGGTTG TACTGGTGGT 
GAAGAAGACG GTGTGGATAA CAGCCACATG GACGCTTCAG CTCTGTACAC CCAGCCGGAA 
GACGTTGACT ACGCGTACAC CAAGCTGAAC GCGATCAGCC CACGTTTCAC CATCGCTGCC 
TCTTTCGGTA ACGTGCATGG CGTATACAAG CCAGGTAACG TGAAACTGAC TCCGACCATC 
CTGCGCGACT CTCAGGAATA TGTTTCCAAG AAACATAACC TGCCGCACAA CAGCCTGGAC 
TTCGTGTTCC ACGGTGGTTC TGGTTCCAGC GCTCAGGAAA TCAAAGACTC CGTTAGCTAC 
GGCGTAGTGA AAATGAACAT CGATACCGAC ACCCAGTGGG CTACCTGGGA AGGTATTCTG 
AAATACTACA AAGATAACGA AGCTTATCTG CAAGGCCAAT TGGGCAACCC GAAAGGCGAA 
GATCAGCCGA ACAAAAAATA CTATGACCCG CGCGTGTGGC TGCGTTCCGC TCAGGCGAGC 
ATGGTTACGC GTCTGGAGCA GGCCTTCAAA GAGCTTAATG CTGTTGATGT GCTGTAA
 
Protein sequence
MSKIFDFVKP GVITGDDVQK VFAVAKENQF ALPAVNCVGT DSINAVLEAA AKVRAPVIVQ 
FSNGGAAFIA GKGLKAEGQQ AAILGAISGA HHVHQMAEHY GVPVILHTDH CAKKLLPWID 
GLLDAGEKHF AATGKPLFSS HMIDLSEESL EENIEICSKY LARMAKIDMT LEIELGCTGG 
EEDGVDNSHM DASALYTQPE DVDYAYTKLN AISPRFTIAA SFGNVHGVYK PGNVKLTPTI 
LRDSQEYVSK KHNLPHNSLD FVFHGGSGSS AQEIKDSVSY GVVKMNIDTD TQWATWEGIL 
KYYKDNEAYL QGQLGNPKGE DQPNKKYYDP RVWLRSAQAS MVTRLEQAFK ELNAVDVL