Gene PC1_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3685 
Symbol 
ID8134665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4159583 
End bp4160323 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content54% 
IMG OID644866985 
Producthypothetical protein 
Protein accessionYP_003019236 
Protein GI253690046 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGAG GTATGATGAA GCTAAATGCA CTGGCGCTGG CCGCCGCGGT AGGGTTTGGC 
GGTATGTCGA TGGCCGCTCA GGCTGCGGAA CTGCCGGATG GGCCGCATAT CGTGACGTCA
GGGACATCCA GCGTAGATGC GACGCCGGAT ATCGCCCGTC TGGCGATTGA AGTGAGCGTG
TCATCGAAGG ATGCGGCGGA AGCGAAAAAG CAGGTCGATG CTCGTGTTGC ACAATATTTT
GATTTTCTGG GTAAAAATGG CATTGAGAAA AAAGACATTA ATGCCGCCAA TTTACGCACA
CAGCCAGAAT ACGACTACCT GAAAACCGGT GGTTCGGTGC TGAAAGGCTA TCGTGCCGTG
CGTCAGGTGG AAGTGACGCT GCGTCAGTTA GATAAGCTGA ACGAACTACT GGATGGGGCG
CTGAAATCGG GGCTGAATGA GATTCGCACG GTAGAATTAG GCGTTGCCAA TCCAGAAACC
TATCGTGATG AAGCGCGTAA GAAAGCCATT GAGCAGGCGA CAAGTCAGGC AGCCGCGTTG
GCGCAGGGCT TCAACGCCAA GCTGGGGCCG ATCTACAGCG TTCGCTACCA CGTTGCCAAC
TATCAGCCGA TGCCAGTGGC CCGGATGTTT AAAGCAGCAG ATGCGGCGGT GCAAACTGAA
GCGGCGCAAA CCTACGAACA GCAAACCATT CACTTTGACG ATCAGGTTGA TGTCGTGTTT
GAGTTACAGC GTACGCCGTA A
 
Protein sequence
MKRGMMKLNA LALAAAVGFG GMSMAAQAAE LPDGPHIVTS GTSSVDATPD IARLAIEVSV 
SSKDAAEAKK QVDARVAQYF DFLGKNGIEK KDINAANLRT QPEYDYLKTG GSVLKGYRAV
RQVEVTLRQL DKLNELLDGA LKSGLNEIRT VELGVANPET YRDEARKKAI EQATSQAAAL
AQGFNAKLGP IYSVRYHVAN YQPMPVARMF KAADAAVQTE AAQTYEQQTI HFDDQVDVVF
ELQRTP