Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3685 |
Symbol | |
ID | 8134665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4159583 |
End bp | 4160323 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866985 |
Product | hypothetical protein |
Protein accession | YP_003019236 |
Protein GI | 253690046 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCGAG GTATGATGAA GCTAAATGCA CTGGCGCTGG CCGCCGCGGT AGGGTTTGGC GGTATGTCGA TGGCCGCTCA GGCTGCGGAA CTGCCGGATG GGCCGCATAT CGTGACGTCA GGGACATCCA GCGTAGATGC GACGCCGGAT ATCGCCCGTC TGGCGATTGA AGTGAGCGTG TCATCGAAGG ATGCGGCGGA AGCGAAAAAG CAGGTCGATG CTCGTGTTGC ACAATATTTT GATTTTCTGG GTAAAAATGG CATTGAGAAA AAAGACATTA ATGCCGCCAA TTTACGCACA CAGCCAGAAT ACGACTACCT GAAAACCGGT GGTTCGGTGC TGAAAGGCTA TCGTGCCGTG CGTCAGGTGG AAGTGACGCT GCGTCAGTTA GATAAGCTGA ACGAACTACT GGATGGGGCG CTGAAATCGG GGCTGAATGA GATTCGCACG GTAGAATTAG GCGTTGCCAA TCCAGAAACC TATCGTGATG AAGCGCGTAA GAAAGCCATT GAGCAGGCGA CAAGTCAGGC AGCCGCGTTG GCGCAGGGCT TCAACGCCAA GCTGGGGCCG ATCTACAGCG TTCGCTACCA CGTTGCCAAC TATCAGCCGA TGCCAGTGGC CCGGATGTTT AAAGCAGCAG ATGCGGCGGT GCAAACTGAA GCGGCGCAAA CCTACGAACA GCAAACCATT CACTTTGACG ATCAGGTTGA TGTCGTGTTT GAGTTACAGC GTACGCCGTA A
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Protein sequence | MKRGMMKLNA LALAAAVGFG GMSMAAQAAE LPDGPHIVTS GTSSVDATPD IARLAIEVSV SSKDAAEAKK QVDARVAQYF DFLGKNGIEK KDINAANLRT QPEYDYLKTG GSVLKGYRAV RQVEVTLRQL DKLNELLDGA LKSGLNEIRT VELGVANPET YRDEARKKAI EQATSQAAAL AQGFNAKLGP IYSVRYHVAN YQPMPVARMF KAADAAVQTE AAQTYEQQTI HFDDQVDVVF ELQRTP
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