| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3682 |
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| Symbol | |
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| ID | 8134662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4156160 |
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| End bp | 4157392 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866982 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003019233 |
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| Protein GI | 253690043 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGG TATCACTGGA AAAAGACAAG ATTAAGTTTC TGTTAGTGGA AGGCGTGCAC
CAAAGCGCGC TGGATAACCT GCGTGCAGCC GGTTACACCA ACATCGAGTT CCATAAGGGC
GCGCTGGATC CTGAGGCGCT GAAAGCCTCC ATCCGCGATG CGCACTTTGT GGGTATCCGC
TCGCGTACTC ATCTGACAGA AGAGATTTTT GCTGCTGCGG AAAAACTGAT CGCGGTAGGG
TGTTTCTGTA TCGGGACTAA TCAGGTTGAT CTGTCGGCTG CGACTAAACG CGGTATCCCG
GTATTTAACG CACCGTTTTC CAATACCCGA TCCGTGGCAG AAATGGTGAT CGGTGAAATG
CTTCTGATGC TGCGCGGTAT TCCGGCAGCG AACGCGAAAG CACACCGTGG TATCTGGCAC
AAACTGGCTG TGGGATCGTT TGAAGCTCGC GGCAAAAAGC TCGGGATCAT CGGCTACGGC
CACATCGGTA CGCAGTTGGG TATTCTGGCT GAAAGCCTGG GTATGCACGT TTATTTCTAT
GATATCGAAA GCAAACTGCC GCTGGGTAAT GCTCAGCAGG TGCGCCACCT GTCCGACCTG
CTGAATATGA GCGATGTGGT GAGCCTGCAC GTGCCGGAAA ATGACAGCAC GCAGAATATG
ATGGGTGCGG AAGAACTGGC GCTGATGAAG CCGGGTGCTA TCCTGATTAA CGCTGCTCGC
GGTACGGTGG TTGATATTCC AGCACTGTGT GAAGTGCTGA GCAGCAAGCA CCTGTCCGGT
GCGGCCATTG ACGTATTCCC GCAAGAGCCG GCAACCAACA GCGATCCGTT CCTGTCGCCG
CTGTGCGAGT TTGACAACGT ACTGCTGACG CCGCATATCG GTGGTTCCAC GCAGGAAGCG
CAGGAAAATA TCGGTGATGA AGTGGCTGGC AAACTGGCGA AATACTCAGA CAACGGTTCT
ACGCTGTCTG CGGTGAATTT CCCGGAAGTA TCGCTGCCTG TTCATGGTGC ACGCGCCAGC
CGCCTGCTGC ACATCCATGA AAACCGTCCT GGCATCATTA CCAAAATTAA CCAGATCTTT
GCTGAGCAGG GCATTAACAT TGCCGCACAG TATCTGCAAA CGACACCTGA AATTGGTTAT
GTGGTGATTG ATGTTGAAAC TGACGGCGCG CAAACGGCGC TGCAACTGAT GAAGGCGATT
CCAGGCACCA TTCGTGCCCG TCTGCTGTTC TGA
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| Protein sequence | MAKVSLEKDK IKFLLVEGVH QSALDNLRAA GYTNIEFHKG ALDPEALKAS IRDAHFVGIR
SRTHLTEEIF AAAEKLIAVG CFCIGTNQVD LSAATKRGIP VFNAPFSNTR SVAEMVIGEM
LLMLRGIPAA NAKAHRGIWH KLAVGSFEAR GKKLGIIGYG HIGTQLGILA ESLGMHVYFY
DIESKLPLGN AQQVRHLSDL LNMSDVVSLH VPENDSTQNM MGAEELALMK PGAILINAAR
GTVVDIPALC EVLSSKHLSG AAIDVFPQEP ATNSDPFLSP LCEFDNVLLT PHIGGSTQEA
QENIGDEVAG KLAKYSDNGS TLSAVNFPEV SLPVHGARAS RLLHIHENRP GIITKINQIF
AEQGINIAAQ YLQTTPEIGY VVIDVETDGA QTALQLMKAI PGTIRARLLF
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