| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3673 |
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| Symbol | |
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| ID | 8134653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4145522 |
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| End bp | 4146409 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866973 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003019224 |
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| Protein GI | 253690034 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAG CCGGTATCAT ACGTGACTTG CTTAACTGGC TGGAAAGCCA TCTCGACCAA
CCGCTATCAC TGGATAATGT GGCGGCGAAA GCGGGTTATT CCAAGTGGCA TCTGCAAAGA
ATGTTCAAAG ACGTGACAGG CCATGCCATT GGTTCATATA TCCGAGCGCG GAGATTGACC
AAAGCGGCGG TTGCACTTTG TCTGACCAGC CGCCCTATCC TTGATATTGC TCTGCAATAC
CGTTTTGATT CACAACAGAC TTTTACCCGC GCGTTCAAAA AGCAGTTTAC CCAAACGCCC
GCGTCTTATC GTCGTTCCGA TAATTGGAAT ACTTTCGGCA TTCGTCCGCC GATCCGGCTC
GGCGCGTTTA CCCTGCCACA ACCGGAATTT GTTACCCTGC CAGAAACACA GCTTCTTGGG
CTAACGCAAA CCTATAATTG CCGCCTGGAA CAGATTTGTA ACTTCCGTAC GGAAATTCGC
GTTCACTATT GGCGTCAATT TTTAGGTGAA ACCTGCTCCG TTCCCCCTGT GCTTTACGGG
CTGCATCATT CACGGCCGAG CAAAGAGAAA GACGACGAAC ACGAAGTGCT CTACACCACC
GCGCTGGAGC CACAGTATCT ACCGGATGAT GTCCATACGG GCGAGCCGAT CACGCTACCG
GGCGGCGACT ACGCGATGTT TGTCTTTGAA GGGCCGAAAG ACGAGCTACA GGATTTCATT
ATCACGCTGT ATGACACCTG TCTGCCGACC TTCCAACTCA CGCGCCGTAA AGGATTTGAT
GCCGAACGTT TCCATCCAGA CGGCACAAAG CGTGATGACA TTCCCGCGAT CATCCGCTGC
GAGTATTTTA TCCCTATCCA GCACCCAGAG CCGCTCTCAG CGCTGTAA
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| Protein sequence | MDQAGIIRDL LNWLESHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GSYIRARRLT
KAAVALCLTS RPILDIALQY RFDSQQTFTR AFKKQFTQTP ASYRRSDNWN TFGIRPPIRL
GAFTLPQPEF VTLPETQLLG LTQTYNCRLE QICNFRTEIR VHYWRQFLGE TCSVPPVLYG
LHHSRPSKEK DDEHEVLYTT ALEPQYLPDD VHTGEPITLP GGDYAMFVFE GPKDELQDFI
ITLYDTCLPT FQLTRRKGFD AERFHPDGTK RDDIPAIIRC EYFIPIQHPE PLSAL
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