Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3672 |
Symbol | |
ID | 8134652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4144835 |
End bp | 4145317 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866972 |
Product | hypothetical protein |
Protein accession | YP_003019223 |
Protein GI | 253690033 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.832034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAA AACGCATCAT GGGAGCGGGT CTGCTATTGC TATCCACCGC TGGCGTCGTC AACGCGGAAG AGGTCGGGTC TGTCGATACT GCCTTTAAAC TGCTGGGGCC AGACCATAAG ATCGTGGTGG AAGCGTTTGA CGACCCGGAT GTCTCAAACG TGACCTGCTA CATTAGCCGA GCCAAAACGG GCGGAATCAA GGGCGGATTA GGGCTGGCGG AAGATACGTC GGACGCGGCT ATTTCCTGTC AGCAGGTTGG GCCGATTACG TTGTCCGATA AAATCAAAAA CGCTGGTGAC CGCGGTTCTG TGGTATTCCA GAAAAGAACC TCGCTGGTTT TCAAGAAATT GCAGGTTGTT CGCTTTTACG ATCAAAAACG CAATGCGCTG ATCTACCTTG CTTACTCCGA TCGCTTAGTC GATGGATCGC CGAAAAATGC GTTAAGCGCG GTGCCGGTTA TGCCGTGGGG AAAGAGTGAA TAA
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Protein sequence | MNIKRIMGAG LLLLSTAGVV NAEEVGSVDT AFKLLGPDHK IVVEAFDDPD VSNVTCYISR AKTGGIKGGL GLAEDTSDAA ISCQQVGPIT LSDKIKNAGD RGSVVFQKRT SLVFKKLQVV RFYDQKRNAL IYLAYSDRLV DGSPKNALSA VPVMPWGKSE
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