| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3665 |
|---|
| Symbol | |
|---|
| ID | 8134645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 4136657 |
|---|
| End bp | 4137430 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644866965 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003019216 |
|---|
| Protein GI | 253690026 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATTA CTATTTCACC TGCAAAAACG CTCGACTACA CCAGTCCTTT GGCCACGACG
CGTTATACGC AGCCGGAACT TCTGGATTAT TCCAGTCAGT TGATTGATGT ATGTAAAAAA
CTGACGCCGG CACAGATCGC CTCGCTGATG AGCATCAGCG ATAAACTGGC TGACCTGAAC
GCAGGCCGCT TTAGCGAGTG GCACCCAGAT TTCACACCGG AGAACGCACG TCAGGCGCTG
CTGGCATTTA AGGGTGACGT CTATACCGGA TTGGCCGCAG AAGATTTCAG CGAGGATGAC
TTCGATTTCG CCCAGCAGCA TCTGCGTATG CTGTCAGGCC TGTATGGCGT GTTGCGACCA
CTGGACTTGA TGCGGCCGTA CCGGCTGGAA ATGGGCACCA AGCTGGAAAA TAAAGCCGGT
AAAGATCTCT ACAGCTTCTG GGGTGACACC ATTACCGAAA AACTGAATCA GGCGTTGCGC
GAGCAAGGTG ACGATGTGCT GGTTAATCTG GCATCAGACG AATATTTCAA AGCCGTCAAA
CCGAAAAAGC TCAATGCCCG CCTGATCAAA CCCGTCTTTT TGGATGAAAA AAACGGCAAA
TTCAAGGTAA TCAGTTTCTA CGCCAAGAAA GCGCGCGGCC TGATGAGTCG TTTCATTATT
CAAAACCGCC TGACCCAACC AGAGCAGTTG AAAGCATTCA ATCTGGACGG TTACTTCTTC
GAGGCTGCGG ACTCTTCGGC TGATGAACTG GTATTTAAGC GCCACGAGCA GTAA
|
|---|
| Protein sequence | MLITISPAKT LDYTSPLATT RYTQPELLDY SSQLIDVCKK LTPAQIASLM SISDKLADLN
AGRFSEWHPD FTPENARQAL LAFKGDVYTG LAAEDFSEDD FDFAQQHLRM LSGLYGVLRP
LDLMRPYRLE MGTKLENKAG KDLYSFWGDT ITEKLNQALR EQGDDVLVNL ASDEYFKAVK
PKKLNARLIK PVFLDEKNGK FKVISFYAKK ARGLMSRFII QNRLTQPEQL KAFNLDGYFF
EAADSSADEL VFKRHEQ
|
|---|
| |