Gene PC1_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3664 
Symbol 
ID8134644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4135418 
End bp4136371 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content52% 
IMG OID644866964 
Producttransaldolase B 
Protein accessionYP_003019215 
Protein GI253690025 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATA AACTGACTTC CCTACGCCAA TTGACCACGG TTGTAGCTGA TACCGGCGAT 
ATTGCGGCAA TGAAACTGTA CCAACCGCAA GATGCGACCA CCAACCCTTC ACTGATTCTG
AACGCGGCGC AAATTCCTGA ATACCGCAAG CTGATCGACG AGGCGATTGC CTGGGCGCGC
GAGCAGAGCA GCGATCGCAA ACAGCAGGTC GTTGATGCTA CGGACAAACT GGCGGTCAAC
ATTGGTCTCG AAATTTTAAA ATTGATCCCA GGCCGCATCT CTACAGAAGT GGATGCACGT
TTGTCTTATG ACACCGAAGC CAGCGTGGCG AAGGCAAAAC ACCTGATCAA ACTGTACAAC
GACGCAGGCA TCAGCAATGA GCGTATCCTG ATTAAGCTGG CGTCAACCTG GCAGGGTATC
CGCGCGGCGG AGCAGCTTGA AAAAGAAGGC ATCAACTGTA ACCTGACGCT GCTGTTCTCC
TTTGCACAGG CGCGCGCTTG TGCTGAAGCG GGCGTATTCC TGATTTCACC GTTTGTTGGC
CGTATCCTCG ACTGGTACAA AGCCAATGGT GATAAGAAAG AGTTCGCACC ACACGAAGAT
CCGGGCGTGG TTTCCGTTAG CGAAATCTAT GATTACTACA AAGAGCACGG CTATGAAACC
GTCGTGATGG GCGCGAGCTT CCGTAACGTT GGCGAAATTC TGGAACTGGC CGGGTGTGAC
CGCTTGACGA TCGCCCCTGC GCTGTTGAAA GAGCTGTCAG AAAGCGAAGG CGAAGTGGTT
CGTAAGCTGT CTTACGCTGG TGAGGTGAAA GTTCGCCCGG CGAAAATGAC GGAAGCGGAG
TTCTACTGGC AGCACAACCA GGATCCAATG GCGATTGATA AACTGGCTGA CGGGATCCGT
AAATTTGCTA TCGACCAGGA AAAACTGGAA AAGATGATTG CCGATTTACT GTAA
 
Protein sequence
MTDKLTSLRQ LTTVVADTGD IAAMKLYQPQ DATTNPSLIL NAAQIPEYRK LIDEAIAWAR 
EQSSDRKQQV VDATDKLAVN IGLEILKLIP GRISTEVDAR LSYDTEASVA KAKHLIKLYN
DAGISNERIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG
RILDWYKANG DKKEFAPHED PGVVSVSEIY DYYKEHGYET VVMGASFRNV GEILELAGCD
RLTIAPALLK ELSESEGEVV RKLSYAGEVK VRPAKMTEAE FYWQHNQDPM AIDKLADGIR
KFAIDQEKLE KMIADLL