Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3664 |
Symbol | |
ID | 8134644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4135418 |
End bp | 4136371 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866964 |
Product | transaldolase B |
Protein accession | YP_003019215 |
Protein GI | 253690025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATA AACTGACTTC CCTACGCCAA TTGACCACGG TTGTAGCTGA TACCGGCGAT ATTGCGGCAA TGAAACTGTA CCAACCGCAA GATGCGACCA CCAACCCTTC ACTGATTCTG AACGCGGCGC AAATTCCTGA ATACCGCAAG CTGATCGACG AGGCGATTGC CTGGGCGCGC GAGCAGAGCA GCGATCGCAA ACAGCAGGTC GTTGATGCTA CGGACAAACT GGCGGTCAAC ATTGGTCTCG AAATTTTAAA ATTGATCCCA GGCCGCATCT CTACAGAAGT GGATGCACGT TTGTCTTATG ACACCGAAGC CAGCGTGGCG AAGGCAAAAC ACCTGATCAA ACTGTACAAC GACGCAGGCA TCAGCAATGA GCGTATCCTG ATTAAGCTGG CGTCAACCTG GCAGGGTATC CGCGCGGCGG AGCAGCTTGA AAAAGAAGGC ATCAACTGTA ACCTGACGCT GCTGTTCTCC TTTGCACAGG CGCGCGCTTG TGCTGAAGCG GGCGTATTCC TGATTTCACC GTTTGTTGGC CGTATCCTCG ACTGGTACAA AGCCAATGGT GATAAGAAAG AGTTCGCACC ACACGAAGAT CCGGGCGTGG TTTCCGTTAG CGAAATCTAT GATTACTACA AAGAGCACGG CTATGAAACC GTCGTGATGG GCGCGAGCTT CCGTAACGTT GGCGAAATTC TGGAACTGGC CGGGTGTGAC CGCTTGACGA TCGCCCCTGC GCTGTTGAAA GAGCTGTCAG AAAGCGAAGG CGAAGTGGTT CGTAAGCTGT CTTACGCTGG TGAGGTGAAA GTTCGCCCGG CGAAAATGAC GGAAGCGGAG TTCTACTGGC AGCACAACCA GGATCCAATG GCGATTGATA AACTGGCTGA CGGGATCCGT AAATTTGCTA TCGACCAGGA AAAACTGGAA AAGATGATTG CCGATTTACT GTAA
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Protein sequence | MTDKLTSLRQ LTTVVADTGD IAAMKLYQPQ DATTNPSLIL NAAQIPEYRK LIDEAIAWAR EQSSDRKQQV VDATDKLAVN IGLEILKLIP GRISTEVDAR LSYDTEASVA KAKHLIKLYN DAGISNERIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG RILDWYKANG DKKEFAPHED PGVVSVSEIY DYYKEHGYET VVMGASFRNV GEILELAGCD RLTIAPALLK ELSESEGEVV RKLSYAGEVK VRPAKMTEAE FYWQHNQDPM AIDKLADGIR KFAIDQEKLE KMIADLL
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