| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3663 |
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| Symbol | |
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| ID | 8134643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4134252 |
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| End bp | 4135340 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644866963 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003019214 |
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| Protein GI | 253690024 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.622797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGACC TTAAATATAA GATATTAAAG CTATTTTCAC ACCCTACCTC GGCCTTCTTC
CTGTTTGGAT TTATTTCCTT TTTTATCACT ATCTTTCTTA CTCATGAAGC AAGCAGAAAC
GCATGGAAAG TAGAACGGCA AAATCTGGAC ATCACCATCA AGACATATGA ATCCTATAAT
GCGGGTGGAG AGGTAACAGA GGCTGACATT ACTCGAAAAA CAGGCTCCTA TGTCTCTGCA
CGGATGAGAA CATGGGTATT TAATACGCGC GACGTTCGTA GCGAATGTAT TAATCGATTA
TCGTCATCGG ACCTGACATT TAATGATATG GCGATTATCC GTATCTGTCA GAATAAACTG
CCATCAATTG GTGAGTATGC AGGCAAAGGC ACCCTTACCA TCATATTTCC GGTGCTATCG
CCCACAGATG AATTATTGGG TATTCGGATT AGAACCACGT CCGAAACACC CCCACCTTCG
TTTTTGTATA CGCTGACGTC TCTTGGCTCC GCGACGATCA TTCTAAGCGT TGTAATACTT
TCTGTCATCT TAGGCAGTTT GCTGTCGCTT CTGGCGAAAA AATACCTGAT AGAATTGCCC
ATCATTGCCA GATATGACGA CCTCACTGGC TATTTACGGC GAGATGCGTT CTTCCTGGCG
GCCAATAAAG CTTTTAGTAT CGCCAATCTG ACCAAGCGCC CCGTTAGCGT TATTCTGATC
GACATCGACT ACTTTAAACA GGTGAATGAT AGCTTTGGTC ATAGCGTCGG TGATGATGCT
TTGAAGTTTG TTGCCGACAC CTTCAAAAAA TCATTTCGCC GCGAAGATAT CTTTGGCCGT
ATTGGCGGCG ATGAATTCGC AATCGTTTTA CCGAATACCG GAATAGACGA TGCGTACACC
ATCGTGGATA GAGCGAGAGA ACGCGTTAGC AATACACCTT GTGAAACCGC TGCAGGGAAA
ATCAGGCTAA CGGTCAGTAT TGGTCTGGTT GAATACCATG TCGCTAAAGA AGATCTTATC
GAAGTGATGA AGCGTGCCGA TGACAATCTT TATACCGCGA AGAAAACCCG TAACGCGACG
GCAAAATAG
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| Protein sequence | MNDLKYKILK LFSHPTSAFF LFGFISFFIT IFLTHEASRN AWKVERQNLD ITIKTYESYN
AGGEVTEADI TRKTGSYVSA RMRTWVFNTR DVRSECINRL SSSDLTFNDM AIIRICQNKL
PSIGEYAGKG TLTIIFPVLS PTDELLGIRI RTTSETPPPS FLYTLTSLGS ATIILSVVIL
SVILGSLLSL LAKKYLIELP IIARYDDLTG YLRRDAFFLA ANKAFSIANL TKRPVSVILI
DIDYFKQVND SFGHSVGDDA LKFVADTFKK SFRREDIFGR IGGDEFAIVL PNTGIDDAYT
IVDRARERVS NTPCETAAGK IRLTVSIGLV EYHVAKEDLI EVMKRADDNL YTAKKTRNAT
AK
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