| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3661 |
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| Symbol | |
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| ID | 8134641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4131817 |
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| End bp | 4133154 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866961 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003019212 |
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| Protein GI | 253690022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.755106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGG ATCAACACGC CGATCCTCGC CGGTTGAACC GGCAGGACTA TAAAACGCTG
TCTCTGGCTG CGCTGGGTGG CGCGTTAGAG TTTTATGACT TTATTATTTT CGTCTTCTTT
GCTGCCGTGA TTGGCGATCT CTTCTTCCCG CCGGATATTC CTGAATGGCT GCGGCAGGTG
CAGACGTTCG GTATTTTCGC CGCAGGCTAT CTGGCTCGCC CGCTTGGGGG CATTATCATG
GCCCACTTCG GTGATAAGAG CGGACGTAAA AGAATGTTCA GCCTCAGTAT ATTGCTGATG
GCGCTACCGA CGCTGGCAAT GGGGCTGCTG CCGACTTATG AAGCTATTGG CATTGCGGCG
CCGCTTCTGC TGCTGTTGAT GCGTGTACTG CAAGGGGCGG CAATCGGCGG GGAAGTCCCC
GGTGCGTGGG TCTTTGTTGC GGAGCATGTG CCTCGCGCCC GCATCGGGTT TGCCTGCGGT
ACGCTGACCG CCGGGCTGAC GATGGGGATC CTGTTGGGCT CGCTGATTGC GACGCTGCTG
AATACTGTGC TTACGCCGGA GCAGATGTCG GGCGGTGGCT GGCGTCTGCC GTTCTTCATC
GGTGGGGTCT TCGGCCTTGT TGCCATGTAT TTGCGCCGCT GGTTGCAGGA AACGCCTATT
TTTATGGAAA TGCAGGCGCA GAAAAAGCTG GCGGAAGAGC TGCCGCTGAA ATCTGTCGTC
TTAAACCATA AACGTGCGGT TGTGGTTTCA ATGCTACTGA CCTGGCTGCT GTCTGCGTGC
ATCGTCGTCG TGATTCTGAT GGCACCGACC TACCTGCAAA AAGTCCACGG CATTCCTGCC
GCATTGGCGT TGCAGGCGAA CTGTCTGGCA ACGATTGCGC TGATGGTGGG CTGCATCGGT
GCAGGGCTGC TGGTCGACCG CTTTGGTGCC AGCAAGCTGT TTATGGTGGG TAGCCTGTCG
CTGGCTGCCT GTAGCTGGTT CTTTTACAGC TCAGCAGCAA GCAGTACGAC ACTGCTCTTT
GTCAGCTATG CGATTGTGGG GCTCAGCGTG GGGGTCGTGG GCGGCGTGCC TTATGTCATG
GTGCGGGCGT TTCCTGCTGC GGTGCGGTTC TCAGGGATTT CTTTTTCCTA TAACGTTTCC
TATGCCATTT TCGGCGGTCT GACACCCGTC TTTGTCACGC TGATCATGAA GGCGACGCCG
CTGGCGCCGG CATTTTATGT CCTGACGCTA GCCGCAGTAG GGTTGCTGTT GGGGATTTAT
TTGCAGCGCG ATCTGGATGC TGATTCGCGA GCGTTGGCCG ACAGCGACGC GCGCGCTCGT
TCGCCTGTTG AGGTGTAA
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| Protein sequence | MTQDQHADPR RLNRQDYKTL SLAALGGALE FYDFIIFVFF AAVIGDLFFP PDIPEWLRQV
QTFGIFAAGY LARPLGGIIM AHFGDKSGRK RMFSLSILLM ALPTLAMGLL PTYEAIGIAA
PLLLLLMRVL QGAAIGGEVP GAWVFVAEHV PRARIGFACG TLTAGLTMGI LLGSLIATLL
NTVLTPEQMS GGGWRLPFFI GGVFGLVAMY LRRWLQETPI FMEMQAQKKL AEELPLKSVV
LNHKRAVVVS MLLTWLLSAC IVVVILMAPT YLQKVHGIPA ALALQANCLA TIALMVGCIG
AGLLVDRFGA SKLFMVGSLS LAACSWFFYS SAASSTTLLF VSYAIVGLSV GVVGGVPYVM
VRAFPAAVRF SGISFSYNVS YAIFGGLTPV FVTLIMKATP LAPAFYVLTL AAVGLLLGIY
LQRDLDADSR ALADSDARAR SPVEV
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