Gene PC1_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3660 
Symbol 
ID8134640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4131090 
End bp4131665 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content53% 
IMG OID644866960 
Producthypothetical protein 
Protein accessionYP_003019211 
Protein GI253690021 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.444217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA ACACGTTGGC AAATCCTGGT CCATTAGGAC TGATGGGCTT CGGGATGACC 
ACTATTCTGT TGAACCTGCA CAACGCAGGC TTTTTCCCAC TTTCTTCCAT CATTCTCAGC 
ATGGGTATTT TCTACGGCGG TATCGCCCAG ATTCTGGCTG GTCTGCTGGA ATATAAAAAA 
GGCAATACGT TTGGCGTGAC CGCATTCACG TCTTATGGCG CATTCTGGCT GACGCTGGTT 
GCCATTCTTA TGCTGCCGAA AATGGGTCTG GCGGAAGCCA GCGATGCCCA GTTCCTTGGC 
GTCTTCCTTG GCCTATGGGG CATCTTCACG CTGTTTATGT TCTTCGGTAC ATTCGGCACC 
AACCGCGCAC TGCAATTTGT CTTCGGTAGC CTGACCGTGC TGTTTGCTCT GCTGGCCGTA 
GGTAACTTCA CCGGCAACCA TGCCCTGCTG ACCTTCGCGG GCTATGAAGG CATCATCTGT 
GGCGCTAGCG CGATTTATCT GGCCATGGCT GAAGTGCTGA ACGAGAAGTT TGGCCGCAGC 
GTCCTGCCAA TCGGTTCATG TGGCGCGTCT CACTAA
 
Protein sequence
MSTNTLANPG PLGLMGFGMT TILLNLHNAG FFPLSSIILS MGIFYGGIAQ ILAGLLEYKK 
GNTFGVTAFT SYGAFWLTLV AILMLPKMGL AEASDAQFLG VFLGLWGIFT LFMFFGTFGT 
NRALQFVFGS LTVLFALLAV GNFTGNHALL TFAGYEGIIC GASAIYLAMA EVLNEKFGRS 
VLPIGSCGAS H