| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3655 |
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| Symbol | rpsT |
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| ID | 8134635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4124678 |
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| End bp | 4124941 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644866955 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_003019206 |
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| Protein GI | 253690016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.225514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTAATA TCAAATCAGC TAAGAAACGC GCCGTACAAT CTGAGAAGCG CCGTAAGCAT
AACGCAAGCC GTCGCTCAAT GATGCGTACT TTCATCAAGA AAGTATACGC GGCGATCGCT
ACTGGCGATA AAGAAGTGGC ACAGAAAGCG TTTAATGACA TGCAACCGAT CGTGGATCGC
CAGGCTGGTA AAGGTCTGAT TCACAAGAAC AAAGCTGCAC GTCATAAATC CAATCTGGTT
GCGCGCATCA ACGCCATGCA ATAA
|
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| Protein sequence | MANIKSAKKR AVQSEKRRKH NASRRSMMRT FIKKVYAAIA TGDKEVAQKA FNDMQPIVDR
QAGKGLIHKN KAARHKSNLV ARINAMQ
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