| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3647 |
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| Symbol | carB |
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| ID | 8134627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4112558 |
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| End bp | 4115782 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866947 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_003019198 |
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| Protein GI | 253690008 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT TAAAAGCATC CTGATTCTGG GCGCAGGCCC GATTGTTATC
GGCCAGGCGT GTGAGTTTGA CTACTCGGGT GCACAAGCCT GTAAAGCACT GCGCGAAGAG
GGCTACCGCG TTATTCTGGT GAACTCTAAC CCGGCAACCA TCATGACCGA CCCGGAAATG
GCCGATGCGA CCTACATCGA GCCGATTCAC TGGGAAGTGG TGCGTAAAAT CATTGAAAAA
GAGCGTCCAG ACGCAGTGCT GCCAACGATG GGCGGCCAGA CCGCGCTGAA CTGTGCGCTG
GAGCTGGAAC GTCAGGGCGT GCTGGCCGAG TTCGGCGTCA CCATGATTGG TGCAACGGCG
GATGCGATTG ATAAAGCAGA AGATCGTCGT CGTTTTGACG TCGCGATGAA GAAGATCGGT
CTGGACACGG CGCGTTCTGG TATCGCACAC ACGATGGAAG AAGCACTGGC TGTGGCGGCT
GATGTTGGCT TCCCGTGCAT CATCCGTCCT TCCTTCACCA TGGGCGGCAC CGGCGGCGGT
ATCGCTTACA ACCGCGAAGA GTTTGAAGAG ATCTGCGAAC GCGGTCTGGA TCTTTCACCC
ACCAAAGAGC TGCTGATTGA TGAATCGCTG ATCGGTTGGA AAGAGTATGA GATGGAAGTG
GTGCGTGATA AGAACGACAA CTGCATCATC GTCTGCTCCA TCGAAAACTT CGATGCTATG
GGGATCCACA CGGGTGACTC CATCACCGTC GCACCGGCAC AAACGCTGAC CGATAAAGAA
TATCAAATCA TGCGTAACGC CTCGATGGCG GTACTGCGTG AAATCGGTGT AGAAACCGGC
GGTTCCAACG TTCAGTTCTC GGTGAACCCG AAAACTGGCC GTCTGATCGT GATTGAAATG
AACCCGCGCG TATCGCGTTC TTCCGCGCTG GCGTCTAAAG CTACGGGTTT CCCGATTGCG
AAAATCGCGG CCAAACTGGC GGTGGGGTAC ACGCTCGATG AACTGATGAA TGACATCACT
GGTGGCCGTA CGCCAGCGTC CTTCGAGCCT GCCATTGACT ACGTTGTTAC CAAGATTCCA
CGTTTCAACT TCGAAAAATT CGCGGGTGCC AACGATCGTC TGACCACGCA GATGAAATCT
GTGGGTGAAG TGATGGCGAT TGGTCGCACA CAGCAGGAAT CCCTGCAGAA AGCGCTGCGC
GGGCTGGAAG TCGGCGCAAC GGGCTTCGAT CCGAAAGTCG ATTTAGATGA CCCTGAAGCG
CTGACCAAAA TTCGCCGCGA GCTGAAAGAT GCCGGCGCAG AGCGTATCTG GTACATCGCC
GATGCCTTCC GCGCAGGGAT GTCTGTCGAT GGCGTGTTTA ACCTGACCAA CGTCGATCGC
TGGTTCCTGG TGCAGATTGA AGAGCTGGTG CGTCTGGAAG AACAGGTCGC AGAGAAAGGT
GCAACCGCAT TGGATGCCGA ATTCCTGCGT ACGCTGAAGC GTAAAGGCTT TGCTGATGCG
CGTCTGGCTA AACTGGCTGG CGTGGCGGAA AGCGAAATTC GCAAACTGCG CGATAAATTC
AACCTGCATC CGGTGTATAA GCGCGTCGAC ACCTGTGCGG CAGAATTCGC CACCGATACG
GCTTACATGT ACTCCACGTA TGAAGAAGAG TGTGAAGCCA ATCCGACTCA GGATCGTGAC
AAAATCATGG TGCTGGGCGG CGGACCTAAC CGTATCGGTC AGGGGATCGA ATTTGACTAC
TGCTGCGTCC ACGCTTCTCT GGCGCTGCGT GAAGATGGTT ATGAAACCAT CATGGTCAAC
TGTAACCCGG AGACCGTTTC AACAGACTAC GATACGTCTG ACCGCTTGTA CTTCGAGCCG
GTAACGTTTG AAGATGTGCT GGAAATCGTT CGTATCGAGA AGCCAAAAGG CGTTATCGTG
CAGTACGGTG GCCAGACGCC GCTGAAACTG GCGCGTGCGC TGGAAGCGGC AGGTGTGCCG
GTTATCGGCA CCAGCCCGGA CGCGATTGAC CGTGCAGAAG ACCGCGAGCG TTTCCAGCAG
GCCGTGAATC GCCTTGGACT GAAGCAACCG GCTAATGCCA CGGTAGCAAC GATTGAGCAG
GCGGTAGAAA AAGCGCGTGG CATCGGTTAC CCGCTGGTCG TCCGTCCTTC TTATGTTCTG
GGTGGTCGTG CGATGGAAAT CGTGTATGAC GAAATCGACC TGCGTCGCTA CTTCCAGACT
GCCGTTAGCG TCTCCAACGA TGCCCCAGTA CTGTTAGACC GCTTCCTTGA CGATGCTATC
GAAGTTGACG TTGATGCGAT CTGTGACGGC GAACGCGTGC TGATTGGCGG CATCATGGAG
CACATCGAGC AGGCGGGCGT TCACTCCGGT GACTCGGCTT GTTCACTGCC GGCTTACACG
CTGAGCAAAG AGATTCAGGA CGTGATGCGT CAGCAGGTTG AGAAACTGGC GTTTGAACTT
TGCGTTCGCG GGCTGATGAA CGTGCAGTTC GCGGTGAAGG ATAACGAAGT TTATCTGATT
GAAGTGAACC CACGTGCCGC GCGTACCGTA CCGTTTGTCT CGAAAGCGAC GGGCGTTCCG
TTGGCGAAAG TCGCAGCACG CGTGATGGCA GGCAAAACGC TGATTGAGCA GGGCGTCACC
AAAGAAATCA TCCCGCCGTA CTACTCTGTG AAAGAAGTGG TGCTGCCGTT CAACAAATTC
CCTGGCGTTG ACCCGATTCT GGGGCCAGAA ATGCGTTCGA CTGGGGAAGT GATGGGCGTT
GGCCGCACGT TTGCCGAAGC GTTTGCCAAG GCGATGCTGG GCAGCAATTC GCACATGAAG
AAAACCGGAC GTGCGCTGCT GTCGGTGCGT GAAGGCGACA AAGCGCGCGT GGTGGATCTG
GCGGCCAAAC TGCTGAAGCA CGGCTTTGAG CTGGATGCGA CGCACGGTAC GGCGATTGAA
CTGGGTGAAG CGGGCATTAA TCCGCGTCTG GTGAACAAGG TGCATGAAGG TCGTCCGCAC
ATTCAGGACC GCATCAAGAA CGGCGAGTAC ACCTACATCG TCAACACTAC CGCAGGGCGT
CAGGCGATTG AAGACTCCAA GCTGATTCGC CGCAGTGCGC TGCAATACAA GGTGCATTAC
GACACGACGC TGAACGGCGG TTTCGCTACG GCAATGTCGT TAACGGCCGA TCCGACGGAG
AAAGTCACCT CCGTGCAGGA AATGCATGCG ATGATTAAAG GCTGA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLAE FGVTMIGATA
DAIDKAEDRR RFDVAMKKIG LDTARSGIAH TMEEALAVAA DVGFPCIIRP SFTMGGTGGG
IAYNREEFEE ICERGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFSVNP KTGRLIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELMNDIT GGRTPASFEP AIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVDLDDPEA
LTKIRRELKD AGAERIWYIA DAFRAGMSVD GVFNLTNVDR WFLVQIEELV RLEEQVAEKG
ATALDAEFLR TLKRKGFADA RLAKLAGVAE SEIRKLRDKF NLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPTQDRD KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN
CNPETVSTDY DTSDRLYFEP VTFEDVLEIV RIEKPKGVIV QYGGQTPLKL ARALEAAGVP
VIGTSPDAID RAEDRERFQQ AVNRLGLKQP ANATVATIEQ AVEKARGIGY PLVVRPSYVL
GGRAMEIVYD EIDLRRYFQT AVSVSNDAPV LLDRFLDDAI EVDVDAICDG ERVLIGGIME
HIEQAGVHSG DSACSLPAYT LSKEIQDVMR QQVEKLAFEL CVRGLMNVQF AVKDNEVYLI
EVNPRAARTV PFVSKATGVP LAKVAARVMA GKTLIEQGVT KEIIPPYYSV KEVVLPFNKF
PGVDPILGPE MRSTGEVMGV GRTFAEAFAK AMLGSNSHMK KTGRALLSVR EGDKARVVDL
AAKLLKHGFE LDATHGTAIE LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIVNTTAGR
QAIEDSKLIR RSALQYKVHY DTTLNGGFAT AMSLTADPTE KVTSVQEMHA MIKG
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