Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3628 |
Symbol | |
ID | 8134608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4092276 |
End bp | 4094642 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866928 |
Product | DNA polymerase II |
Protein accession | YP_003019179 |
Protein GI | 253689989 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCAGG TTCGTCAGGG GTTTCTACTG ACCCGCCACT GGAATGACAC GCCAACTGGC ACGCAGGTTG AATTCTGGTT GGCCACCGAT GAGGGGCCGC TGCTGGCACG CCTGCCGCCA CAGCAGGCCA TTGCCTTTAT TCCCGCGCAG CAAGAAGCCC GTGCAAGAAC GCTTTTACAG CAGGAGAAAC GCTGGCAGTT AAAACCGCTC GCCATGCAGG ATTTCCACCA TCAGCCGCTG CTGGGGCTGT ATTGCCCACA ATATCGGCAG CTACTGCGGC TGGAGAAATT GCTGCGTGAA GGCGGCGTTC AGGTTTACGA AGCGGATATT CGCCCGACGG AACGTTTTCT GATGGAGCGC TTTATCACCG CGCCCGTGTG GTTCAGCGGT ACGCCCACGT CAGATGGCCT GCTGACGGAC GCTCGCATGA AACCGAACCC CGATTACCGC CCGACGCTCA AACTGGTGTC GCTGGATATC GAAACCAACC GCCACGGCGA GCTTTACTGC ATTGGGCTGG AAGGCTGCGG ACAGCGCCAG GTTTACATGC TCGGCCCGCC GAACGGCACG CCTGCCGAAC ACGAGGATTT TACGCTGGAG TACGTCGCCA GCCGCCCGCA ACTGCTGGAA AAGCTGAATG TCTGGATGCA GCAGCACGAT CCCGATGCCA TCATTGGCTG GAATCTGGTG CAATTTGACC TGCGCGTCTT ACAGAAACAT GCCGAGCGCT ACAACATTCC GCTTGAGCTG GGACGCAACG GGCAGGCACT GGAATGGCGG GAGCACGGCT TTAAGCAGGG GCATTTCTTT GCCAGCGCCA CCGGTCGCCT GATTATTGAC GGTATTGAAG CGCTCAAATC CGCGACGTGG AATTTTGCTT CGTTTAGTCT GGAATTTGTC GCACAGTCTC TGCTGGGAGA AGGCAAAGCC ATCGACACGC CCTATCAACG GATGGATGAA ATCGACCGTC GCTTTGCCGA AGATAAACCC GCACTCGCGC GCTATAACCT GCAGGACTGC GAACTGGTCA CACGTATTTT CGCTAAAACC GAACTACTGC CGTTCTTACT GGAGCGCGCC AGCGTCACCG GCCTGGCGGC CGACCGCAGC GGCGGTTCCG TCGCGGCATT TTCTCACCTT TATTTACCGC GCATGCATCG CATGGGTTAT GTCGCCCCGA ATCTGGGCGA CGTCGCGCTT GAAGCCAGCC CCGGCGGGTT TGTCATGGAT TCGCGCCCCG GTCTGTATGA TTCGGTGCTC GTGCTGGATT ACAAGAGCCT CTACCCTTCC ATCATCCGCA CGTTCCTGAT CGATCCGGTC GGACTCGCGG TGGGAACGCA AAACCCAGAC GCGCAGCACG CCGTCCCCGG CTTTCGCGGC GCGTGGTTCT CGCGCGAACA GCACTGCCTG CCCGCGATTG TCGAGCAAAT CTGGCAGGGG CGCGAAGCCG CGAAGCGCAC CCACAACAAG CCACTATCCC AGGCGTTGAA GATTATCATG AATGCCTTTT ACGGCGTGCT GGGTGCAACG GGCTGTCGCT TCTTCGATCC GCGTCTCGCG TCCTCCATCA CCTTACGCGG CCATGAAATC ATGCGTAAAA CGCGCGAGCT TATCGAGGCA CAAGGCTATC AGGTCATTTA TGGCGATACC GATTCCACGT TCGTCTGGCT TAAACACGCA CACAGCGAAG AGAAAGCCAC AACGATTGGC AACGCGCTGG TGCAGCACGT TAACCAGTGG TGGACACAGC ATCTGCACGA CACTCAGCAG TTAACCAGCG CACTGGAGCT GGAGTTTGAA ACCCATTTCC GCCGTTTCCT GATGCCAACC ATTCGCGGTG CCGAACAAGG CAGCAAAAAA CGCTATGCCG GGCTTATCGA CACACCACAA GGCGAGAAAA TGGTGTTCAA AGGGCTAGAA ACCGTGCGGA CCGACTGGAC ACCGCTAGCG CAGCAGTTTC AACAACAGCT CTATCTGCTG ATTTTTCAGC AACAGCCTTA TCAGGATTGG CTGCGGGATT ATGTCGATCG CACCCTGAAC GGAGAGTTCG ACGATCTGCT GATCTATCGT AAGCGGCTGC GTCGTCGGCT CGATGACTAC CAGCGTAACG TGCCGCCACA CGCCAGAGCC GCAAAAATCG CCGATGACTA TAACCGTCAG CAAAGCCGAC CGCTGCAATA CCAAAACGGT GGCTGGATCA GCTATGTGAT GACCGTCAAC GGCCCCGAAC CGCTGGAAAC CCGACATTCG CCGCTGGATT ATCAGCACTA TGTCGAACGC CAGCTCCAGC CGGTCGCGGA TGCCATTCTT CCTTTCCTGC ATGATGACTT TGCTACACTG GTAACAGGCC AAATGGGCCT GTTTTAA
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Protein sequence | MTQVRQGFLL TRHWNDTPTG TQVEFWLATD EGPLLARLPP QQAIAFIPAQ QEARARTLLQ QEKRWQLKPL AMQDFHHQPL LGLYCPQYRQ LLRLEKLLRE GGVQVYEADI RPTERFLMER FITAPVWFSG TPTSDGLLTD ARMKPNPDYR PTLKLVSLDI ETNRHGELYC IGLEGCGQRQ VYMLGPPNGT PAEHEDFTLE YVASRPQLLE KLNVWMQQHD PDAIIGWNLV QFDLRVLQKH AERYNIPLEL GRNGQALEWR EHGFKQGHFF ASATGRLIID GIEALKSATW NFASFSLEFV AQSLLGEGKA IDTPYQRMDE IDRRFAEDKP ALARYNLQDC ELVTRIFAKT ELLPFLLERA SVTGLAADRS GGSVAAFSHL YLPRMHRMGY VAPNLGDVAL EASPGGFVMD SRPGLYDSVL VLDYKSLYPS IIRTFLIDPV GLAVGTQNPD AQHAVPGFRG AWFSREQHCL PAIVEQIWQG REAAKRTHNK PLSQALKIIM NAFYGVLGAT GCRFFDPRLA SSITLRGHEI MRKTRELIEA QGYQVIYGDT DSTFVWLKHA HSEEKATTIG NALVQHVNQW WTQHLHDTQQ LTSALELEFE THFRRFLMPT IRGAEQGSKK RYAGLIDTPQ GEKMVFKGLE TVRTDWTPLA QQFQQQLYLL IFQQQPYQDW LRDYVDRTLN GEFDDLLIYR KRLRRRLDDY QRNVPPHARA AKIADDYNRQ QSRPLQYQNG GWISYVMTVN GPEPLETRHS PLDYQHYVER QLQPVADAIL PFLHDDFATL VTGQMGLF
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