| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3616 |
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| Symbol | |
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| ID | 8134596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4077806 |
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| End bp | 4079464 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866916 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_003019167 |
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| Protein GI | 253689977 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.455862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCC CTCGATTGCA ACAACAGTTC ATCCGCCTGT GGCAACACTT TCAGGGACAA
ACCACCGACA CCACGCTGCA AGAGCTAACC GGGGTGTTGA ACTGTTCCCG ACGTCATATC
CGCTCATTGT TGAACGCGAT GCAGCAAGAA GGCTGGCTCG TCTGGCAGGC AGAAGCTGGC
AGGGGGAAGC GCTCTCAACT GTCATTTGTT TATACCGGAT TAGCACTACA GCAGCAGCGC
GCAGAGGATC TGCTGGAACA GGATCGCATT GAGCAACTGG TGCAATTGGT CGGTGATAAA
GAAGCGATAC GCCAGATGTT ACTTGCTCAC CTCGGGCGGA GCTTCCGGCA GGGAAAGCAT
ATTCTGCGTA TTCTCTATTA CCGCCCATTA CGCAATTTGC AGCCGGGATC GGCGCTGCGG
CGTTCTGAAA TGCACATCGC ACGGCAAATT TTCAGCGGTC TTACCAATAT AAATGAGGAA
AATGGGGAAG TTGAACCCGA TCTGGCTCAT CACTGGCAGA GGGTCTCCTC CCTGCACTGG
CGCTTCTATC TGCGCCCGGC TATCCGTTTT CATCACGGAC GAGAGCTCAC GATGGATGAC
ATCACCACGT CACTCTCTCG TCTTATTCCG CTCCCGCTCT TTTCTCATAT TGAAAGCGTC
ACCTCGCCAA TGCCCTTCGT GATTGATATT CGGTTAAACA GCCCGGATAA CTGGCTACCG
TGGTTATTAG GCAGCGTGCA CGCCATGATT TTGCCGCAAG AGTGGCAAAC CCTACCCGAT
TTTGCCCAGC ACCCAATTGG TACCGGCCCT TATGCCGTGG TACGCAATAA CAGTAATCAA
TTGAAAATTC GCGCCTTCGA TGACTATTTT GGCTATCGGG CGCTGATTGA TGAGGTCAAT
ATCTGGGTTC TGCCCGACGA GCCGGAGGAA ATGCCAGTAT CTATCCAACT CCAGTCTGAC
AATTCTCGTC ACGAACAGTT AGAAAGCCGG ATGGAAGAAG GCGGCTATTT CCTGCTGTTC
GACAAGCGTT CGCCGTTAGC ATCACGGCCG GAAGCTCAGC GATGGCTCAG GCAGATATTT
AACCCCATTT CGCTACTCAA CCACGCCAAT ACCAGCAACC AGCGTGACTG GTCGCCCGCC
TACAGCCTGC TGCCACGCTG GCACCATCAC CATCCCGATG TACCGCAATC CATTCCTAAA
GGGCTGACGG ACGTCACACT CACGTTCTAT CAGGCACATC CTGAATACCG GATATTAAGT
GAGATTATGC GCACGCTGCT GGCACAGCAC GGCGTCACGT TGCATATTCA GACGGTCAGC
TATGAAGACT GGTATCAGGG CAATGCCGAC AGCGATATCT GGTTTGGTAG CCTGAATTGT
TACCTGCCGA TCGAATTTTC CCTGTTCGCG ATGCTCTACG AACTCCCGCT GGCCCAGCAC
TGTCTGGATG ACAATCTGCA TGCAGATGCA CAGCAGTGGC GTAACCAGAC GCTGCCGATG
GCGGAGTGGT GTGAAAAACT GATCGCCAGC GGTCAACTGC ACCCTCTGCT GCACCATTGG
CTGCAACTTC AGGGGCAGCG CAGTATGCGC GGCGTCCGGA TGAATATGCT GGGCTGGTTT
GATTTTAAAT CTGCCTGGTT CGCGCCGCCG GAACGCTGA
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| Protein sequence | MSSPRLQQQF IRLWQHFQGQ TTDTTLQELT GVLNCSRRHI RSLLNAMQQE GWLVWQAEAG
RGKRSQLSFV YTGLALQQQR AEDLLEQDRI EQLVQLVGDK EAIRQMLLAH LGRSFRQGKH
ILRILYYRPL RNLQPGSALR RSEMHIARQI FSGLTNINEE NGEVEPDLAH HWQRVSSLHW
RFYLRPAIRF HHGRELTMDD ITTSLSRLIP LPLFSHIESV TSPMPFVIDI RLNSPDNWLP
WLLGSVHAMI LPQEWQTLPD FAQHPIGTGP YAVVRNNSNQ LKIRAFDDYF GYRALIDEVN
IWVLPDEPEE MPVSIQLQSD NSRHEQLESR MEEGGYFLLF DKRSPLASRP EAQRWLRQIF
NPISLLNHAN TSNQRDWSPA YSLLPRWHHH HPDVPQSIPK GLTDVTLTFY QAHPEYRILS
EIMRTLLAQH GVTLHIQTVS YEDWYQGNAD SDIWFGSLNC YLPIEFSLFA MLYELPLAQH
CLDDNLHADA QQWRNQTLPM AEWCEKLIAS GQLHPLLHHW LQLQGQRSMR GVRMNMLGWF
DFKSAWFAPP ER
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