Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3594 |
Symbol | murD |
ID | 8134574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4051993 |
End bp | 4053309 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866894 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_003019145 |
Protein GI | 253689955 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGACT ATCAGGGTAA AAAAGTCGTC ATTATCGGGT TGGGTCTGAC CGGGCTCTCC TGTGTTGATT TCTTTGTCGC ACGCGGTGTG ATTCCGCGCG TGGTGGATAC CCGTATCAGT CCGCCGGGTC TGGATAAGTT GCCGGAGCAG GTAGAGCGAC ACCTCGGCAG CTTGAATGAA GACTGGCTGA TGAGCGCAGA TTTGATCGTC GCCAGTCCCG GCATTGCGTT GGCGACGCCG ATTCTGTGTG ATGCTGCCGA CGCTGGCATT GAAATTGTCG GTGATATCGA GCTGTTCTGC CGTGAAGCGC AGGCTCCGAT TGTGGCGATT ACCGGTTCTA ACGGTAAAAG CACGGTGACG ACGCTGGTCG GTGAAATGGC GCGTGCCGCA GGCTGGCAAG TGGGGGTTGG CGGCAATATC GGCCTGCCTG CGCTGCAACT GCTTGAACAG CCCGCTCAGC TTTATGTATT GGAGCTGTCG AGTTTTCAAC TGGAAACGAC GAGCAGTCTG CACGCCGCTG CGGCAACCAT TCTGAACGTG ACGGAAGATC ACACCAACCG TTATCCGTTT GGCCTACAGC AGTATCGGGC GGCCAAATTG CGTATTTATG AGCATGCAGA TTTATGTGTT GTGAACGCTG ATGATGCGCT GACTATGCCG GTTCGCGGTG CGGATGCGCG CTGCCGTAGT TTTGGTGTCG ATGTCGGCGA TTATCACCTT AATCGTCAGC AGGGAGAAAC CTGGCTGCGG GTTGATGGTG AACGTGTGCT TAACACACGT GAAATCAAGC TGGTCGGGCA ACACAATTAT ACGAATGCAT TGGCGGCGCT GGCGCTGGCG GATGCTGTGA AGATCCCGCG TGCTTCTGCG CTGACGGCGT TGACGACGTT TGCCGGGCTG CCGCACCGTT TTCAAATGGC CTTCGAGCAT AACGGCGTGC GGTGGATCAA CGATTCTAAA GCCACCAATG TGGGCAGCAC TGAGGCCGCA TTGAGCGGCT TGACTGTCGA AGGCACGTTG CACCTGCTGT TAGGCGGTGA TGGGAAATCT GCCGATTTCT CTCCGCTGGT GCCGTATTTA CAGGGTGAGC ACATTCGTTT GTATTGCTTC GGTCGTGATG GACAGCAGTT GGCTGCGTTG CGCCCGGAAA TTGCTGAACA AACAGAAACG ATGGAGCAGG CGATGCGTGT CATCGCCGAA CGCGTTAAGC CGGGTGATAT GGTGTTACTG TCGCCAGCCT GCGCAAGTTT GGATCAGTTC CGCAGTTTTG AACAGCGAGG CGATGAGTTT GCTCGTCTGG CGGAGGAGTT AGGCTGA
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Protein sequence | MVDYQGKKVV IIGLGLTGLS CVDFFVARGV IPRVVDTRIS PPGLDKLPEQ VERHLGSLNE DWLMSADLIV ASPGIALATP ILCDAADAGI EIVGDIELFC REAQAPIVAI TGSNGKSTVT TLVGEMARAA GWQVGVGGNI GLPALQLLEQ PAQLYVLELS SFQLETTSSL HAAAATILNV TEDHTNRYPF GLQQYRAAKL RIYEHADLCV VNADDALTMP VRGADARCRS FGVDVGDYHL NRQQGETWLR VDGERVLNTR EIKLVGQHNY TNALAALALA DAVKIPRASA LTALTTFAGL PHRFQMAFEH NGVRWINDSK ATNVGSTEAA LSGLTVEGTL HLLLGGDGKS ADFSPLVPYL QGEHIRLYCF GRDGQQLAAL RPEIAEQTET MEQAMRVIAE RVKPGDMVLL SPACASLDQF RSFEQRGDEF ARLAEELG
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