| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3583 |
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| Symbol | |
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| ID | 8134563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4038975 |
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| End bp | 4041677 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866883 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_003019134 |
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| Protein GI | 253689944 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00157477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCATGA ATATCCTAAC CAAAATTTTT GGTAGCCGTA ACGATCGTAC GCTGCGCCGT
ATGCGTAAAA ATGTTGACGT CATCAATCGC TTAGAACCTG AAATGGAAAA GCTGTCGGAT
GAGGAGCTGC AAGCGAAAAC GCTGGAGTTT CGTGTTCGTC TGGAAAAAGG TGAGTCGCTG
GAGAACCTGC TGCCGGAAGC CTTCGCTGTC GTACGTGAAT CCAGTAAGCG TGTATTTGGC
ATGCGTCACT TCGATGTGCA GCTTATCGGC GGTATGGTAC TGAACGAGCG TTGCATTGCG
GAGATGCGTA CTGGTGAAGG TAAAACGTTG ACGGCAACGC TGCCTGCCTA CCTGAATGCG
CTGACTGGCC GCGGCGTACA CGTGGTTACC GTGAACGACT ATCTGGCACA GCGTGATGCC
GAAAATAACC GTCCATTGTT TGAATTCCTT GGTCTGAGCG TTGGTATTAA CCTGCCGGGA
ATGCCTGCGC CGGCGAAGCG CGAAGCCTAT GCTGCTGATA TCACCTACGG TACCAATAAC
GAATACGGTT TTGACTACCT GCGTGACAAC ATGGCATTCA GCCCGGAAGA ACGCGTGCAG
CGTAAATTGT ACTACGCGCT GGTGGATGAG GTTGACTCCA TCCTGATCGA TGAAGCGCGT
ACGCCGCTGA TCATTTCCGG CCCGGCTGAA GATAGCTCCG AGCTGTATAT CAGCGTTAAC
AAAATTATCC CTCACCTGAT CCGTCAGGAG AAAGAAGATT CGGATACCTT CCACGGCGAA
GGCCACTTCT CTGTTGATGA AAAAGCGCGT CAGGTTAACC TCACCGAGCG TGGTCTGGTT
CTGGTCGAAG AACTGCTGGT GAAAGAAGGC ATTATGGAAG AGGGGGAATC ACTGTACTCC
CCAACGAACA TCATGCTGAT GCACCATGTG ACCGCCGCGT TGCGTGCGCA TGTGTTGTTT
ACCCGCGATG TTGATTACAT TGTGAAAGAC GGTGAAGTGA TCATCGTTGA CGAACACACG
GGCCGTACTA TGCAGGGGCG TCGCTGGTCC GATGGTCTGC ATCAGGCGGT GGAAGCAAAA
GAGAAGGTGA CGATTCAGAA TGAAAACCAG ACGCTGGCTT CCATTACCTT CCAGAACTAC
TTCCGCCTGT ATGAAAAACT GGCGGGGATG ACCGGTACGG CAGATACTGA AGCGTTCGAA
TTCAGCTCTA TCTACAAGCT GGATACCATT GTGGTGCCGA CCAACCGTCC GATGATTCGT
AAAGATTTGC CTGATCTGGT CTACATGACT GAGCAGGAAA AAATCGATGC CATCATTGAA
GATATCAAAG AGCGTTCAGT AAAAGGTCAG CCGATTCTGG TCGGTACAAT CTCCATCGAG
AAATCCGAAG TGGTTTCTCA TGCGCTGGAA AAAGCGGGCA TCAAACATAA TGTGTTGAAT
GCCAAATTCC ACGCCATGGA AGCTGATATT GTTGCTCAGG CGGGTCAGGC TGGTGCGGTG
ACCATCGCGA CCAACATGGC CGGTCGTGGT ACGGATATCG TCTTGGGGGG GAGCTGGCAG
GCGGAAGTGG CGCTTCTGGA AAACCCGAAT GATGAGCAAA TTGCAGAAAT CAAAGCGGCC
TGGAAAGTGC GCCATGATGC AGTATTAGCT GCGGGCGGTT TGCATATTAT CGGTACTGAG
CGCCATGAAT CTCGCCGTAT TGATAATCAG CTACGCGGCC GTTCCGGTCG TCAGGGGGAT
GCCGGTTCAT CACGCTTCTA TCTGTCGATG GAAGATGCGC TGATGCGTAT CTTTGCCTCC
GATCGTGTTT CCAATATGAT GCGTAAACTG GGCATGAAGC CGGGTGAAGC CATTGAGCAC
CCGTGGGTCA CCAAGGCAAT TGCTAACGCC CAGCGCAAAG TGGAAAGCCG CAACTTTGAT
ATTCGTAAGC AATTGCTGGA ATACGATGAT GTGGCGAACG ACCAGCGTCG TGCGATCTAT
ACACAGCGTA ACGAACTGCT GGATGTATCT GATATCAGTG AAACCATCAC CAGTATTCGT
GAGGATGTGT TTAAAGCGAC AATCGACAGC TATATTCCGC CGCAGTCTCT GGAAGAAATG
TGGGATGTAG AAGGTCTGGA ACAGCGCCTG AAGAACGATT TCGATCTGGA TATGCCAGTC
AAAGCGTGGC TGGATAAAGA GCCAGAGCTG CACGAAGAAA CGCTGCGTGA GCGTATTTTC
CAGCAGGCGC TTGAGGTTTA TCATCGCAAA GAAGAAGTGG TCGGCAGCGA AGTCATGCGC
AACTTCGAAA AAGGCGTCAT GTTGCAGACG CTGGATTCAC TGTGGAAAGA GCACCTGGCA
GCAATGGATT ATCTGCGTCA GGGCATCCAT CTGCGTGGCT ATGCACAGAA AGATCCGAAG
CAGGAATATA AGCGTGAGTC GTTCTCTATG TTTGCTGCGA TGTTGGAATC ACTGAAATAT
GAAGTGATCA GCACGCTGAG CAAAGTCCAG GTGAGAATGC CGGAAGAGAT CGAAGCGCTG
GAGCAGCAGC GCCGTGAAGA AGCCGAACGT TTGGCACGGC AGCAGCAGCT GAGCCATCAG
GAAGAAGATA GCCTGAACAC CGGTTCACCG GCGCAGGCAG ATCGTAAAAT TGGACGTAAC
GATCCTTGTC CATGTGGTTC AGGCAAGAAA TATAAGCAGT GCCACGGCCG CTTACAGAAA
TAA
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| Protein sequence | MVMNILTKIF GSRNDRTLRR MRKNVDVINR LEPEMEKLSD EELQAKTLEF RVRLEKGESL
ENLLPEAFAV VRESSKRVFG MRHFDVQLIG GMVLNERCIA EMRTGEGKTL TATLPAYLNA
LTGRGVHVVT VNDYLAQRDA ENNRPLFEFL GLSVGINLPG MPAPAKREAY AADITYGTNN
EYGFDYLRDN MAFSPEERVQ RKLYYALVDE VDSILIDEAR TPLIISGPAE DSSELYISVN
KIIPHLIRQE KEDSDTFHGE GHFSVDEKAR QVNLTERGLV LVEELLVKEG IMEEGESLYS
PTNIMLMHHV TAALRAHVLF TRDVDYIVKD GEVIIVDEHT GRTMQGRRWS DGLHQAVEAK
EKVTIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FSSIYKLDTI VVPTNRPMIR
KDLPDLVYMT EQEKIDAIIE DIKERSVKGQ PILVGTISIE KSEVVSHALE KAGIKHNVLN
AKFHAMEADI VAQAGQAGAV TIATNMAGRG TDIVLGGSWQ AEVALLENPN DEQIAEIKAA
WKVRHDAVLA AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDALMRIFAS
DRVSNMMRKL GMKPGEAIEH PWVTKAIANA QRKVESRNFD IRKQLLEYDD VANDQRRAIY
TQRNELLDVS DISETITSIR EDVFKATIDS YIPPQSLEEM WDVEGLEQRL KNDFDLDMPV
KAWLDKEPEL HEETLRERIF QQALEVYHRK EEVVGSEVMR NFEKGVMLQT LDSLWKEHLA
AMDYLRQGIH LRGYAQKDPK QEYKRESFSM FAAMLESLKY EVISTLSKVQ VRMPEEIEAL
EQQRREEAER LARQQQLSHQ EEDSLNTGSP AQADRKIGRN DPCPCGSGKK YKQCHGRLQK
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