| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3576 |
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| Symbol | |
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| ID | 8134556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4032594 |
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| End bp | 4034066 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866876 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019127 |
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| Protein GI | 253689937 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.356057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACT CGTCCTTCTC CTCCGAGCAT ACGCTCAGCG AACTACAGAC GCTGTGCCGA
CGTTATCAGG CATTACTACT TAACCTCGAT GAACAAACAC TGTCGGTTGC AGTCACGATC
TCCCCTTCGG CGGAGATGAT TGCCGCGCTG CGTTTTGCCA GCAATCGCCG CATTATGGTG
GAGCAATGGC CGCAGGCCAG AATGGAACAG CAGCTTAACC CCGTGAATGC CGTTGCCGAG
CCCACAGAGA CTTACCATAC CAGCATTTAT AACAACGGCA CCGGGCAACA AGATCATGAC
GACGACTCCC CCGTTGCACA ATTTATCCAT CAAACGTTGC GTCTCGCGGT TCAGCGACGC
GCCTCGGATA TTCACTTTGA GCCGTTACTG GACAACTATC GCGTACGGCT ACGCATTGAT
GGCGTGTTAC AGGCAATATC CGCACCGCCT CCCGAACTGA CAAACCGTAT TACCGCGCGG
CTGAAAATCA TGGGTAAGTT GAACATCGCC GAACGGCGAT TGCCGCAAGA CGGTCAGTTC
AGCCTGATGC TGGATCAACA AACCTACTCG TTACGTATCG CTACACTCCC TGTACAGCAG
GGAGAAAAAG TGGTGTTGCG TATTTTGCAA ACGCACCAGC AGGAGCTAGC GCTAGATAAA
CTTGGGCTTA CCGCAAAAGC ATTACAGCAG GTGATTCACG TGCTGAGCGC CTCACAGGGG
ATGCTGTTAG TTACGGGCCC GACAGGCAGT GGAAAAACGG TCACGCTTTA CAGCGCGATA
CGCTGGCTGA ACGATAGCAG CCGCAATATC TGTAGCGTAG AAGATCCCGT TGAGATCCCC
TTGCAGGGTA TCAACCAAAC GGCAATCAAC CCTAAAGCCG AGTTGGAATT TGGCCGAGTG
TTACGTGCGC TGCTACGTCA GGATCCCGAC GTGATTATGA TCGGCGAAAT CCGCGATGCC
GAAACCGCAG AAATTGCGGT AAAAGCCGCA CAAACCGGTC ATTTGGTCAT GTCCACGTTG
CATACCAACT CTGCCGTAGA AACGCTAACC CGACTCAGTC ACCTGGGCAT CCCCGGCTAT
CTGTTAGCTG CGGCGCTAAA GCTCATCATC GCACAACGCC TTGTACGTCG CTTATGTCCA
CACTGTAAAA CGCCGGGAGA ATCACTACTT TCTCTGCCAA ACGACATATG GCAAGGGCCA
CTGCACCATT GGCAAGCCCG CGGCTGTAGC CACTGTTTCT CTGGCTACTA TGGCCGCGTC
GCGATCTATG AATTACTTCC CATCACGCCA GATTTTCAGG CAGCGCTAGC GGGCAATGCC
AGCGCAGGGG AATTATCTGC GCTATCTCGC CATTCAGGTT TCCCAACGTT GTTGGCTGCG
GGTCTCGAGT TGGTCAACGA CGGCCTGACC TCCCTCGCTG AAGTCTATCG TGTTGTGGGC
GATGAACACG CTATGAATCA GGAGGCGCAA TGA
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| Protein sequence | MTDSSFSSEH TLSELQTLCR RYQALLLNLD EQTLSVAVTI SPSAEMIAAL RFASNRRIMV
EQWPQARMEQ QLNPVNAVAE PTETYHTSIY NNGTGQQDHD DDSPVAQFIH QTLRLAVQRR
ASDIHFEPLL DNYRVRLRID GVLQAISAPP PELTNRITAR LKIMGKLNIA ERRLPQDGQF
SLMLDQQTYS LRIATLPVQQ GEKVVLRILQ THQQELALDK LGLTAKALQQ VIHVLSASQG
MLLVTGPTGS GKTVTLYSAI RWLNDSSRNI CSVEDPVEIP LQGINQTAIN PKAELEFGRV
LRALLRQDPD VIMIGEIRDA ETAEIAVKAA QTGHLVMSTL HTNSAVETLT RLSHLGIPGY
LLAAALKLII AQRLVRRLCP HCKTPGESLL SLPNDIWQGP LHHWQARGCS HCFSGYYGRV
AIYELLPITP DFQAALAGNA SAGELSALSR HSGFPTLLAA GLELVNDGLT SLAEVYRVVG
DEHAMNQEAQ
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