| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3558 |
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| Symbol | |
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| ID | 8134538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4008981 |
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| End bp | 4010114 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866858 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003019109 |
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| Protein GI | 253689919 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTGA GAAGTATTTG CATTACCATT TTGGCGCGGT CATTGTTACA TTTGTCATTC
AGGACGGGGT TTGCTCTAGC AGCAAAATGT TTTGCCAAAG CATCAAAATG GAAGGCGCAG
GTCGAAGGGT TTAATCAGGT AGGTAATCAC GTGCGCAGCT TCACACAGTC ATCAAAGCCG
ATCTATAAAG ATCACATCGT TCAGCAATCC AGCCTGGTCG CGAACAATTA CCGTTTTATC
GGCCCCCGGC TGATCGATAA CACGCCGGTG CTGTTCGGCT CGTTCAGCGT CGTGCAGCTC
AATCCACATC TGATCCTGCA TACGGCGGAT GTGATTAATC GCCACAACAT GAAAACCCAA
AATCTGCTGG ATGACGCCAT CAAGATCGCC ATCGTGGTGA GCGGTAATGC GCACATCTCA
TTTGGCCATC AGGAGCTACA TCTGGGGGAG AAACAACCGG CTTCGCTGAT TGCGTTGACA
GAACCAACGA TGTTTACCCG TATCGGCAAA CGTGATGAAT ATGAGCGAAC GATTACGCTA
ACATTCGACA GAGAATGGCT GTACGGCAAC ATGATGGATA CCGTTGGCGA CTGGCAGGCC
ATCCACGATT TCACACAGAC CCATCTGGCA ACGCATCTGT GGACACCGTC CCGACAGGCA
CTGGCCATTG CCTTACAAAC GCTGGACGCT GAACCTTGCC AAACGCCGCT CCAGCGCCTT
TATCTGGAAA CGCAGTGTAT GGGCCTGATT ATCGAGGCCT TTACGTCATT GACCGCCAGC
GTAGCGCAGG AAAAAAGCAG CGGCGTCACC CTGCGCGGCT ACCATCGCAT TCAACAGGTC
AGAGAGATGC TGGAAAGCGG CAGCGCCGAT CAGCTTTCGA TGAGTGAGAT AGCCAAAAGC
GTCAACATGA GTGAAAGCAC GCTACAGCGC CATTTTCGTC AAACATTCAA TATGAGCGTG
TTTGAGTACC TGCGTAACAG CCGCTTGCAG CGCGCTATGC TGGCCTTGCA AAAAGACGGC
ATCGGTATTG CGCAGGCGGC CAGCATCGCC GGTTACAACA GCCCCGCCAA CTTTGCCACG
GCGCTGCGTC GTGCATTCGG GATTACACCG GGGCAGTTGA AAGACCGCTT CTGA
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| Protein sequence | MLLRSICITI LARSLLHLSF RTGFALAAKC FAKASKWKAQ VEGFNQVGNH VRSFTQSSKP
IYKDHIVQQS SLVANNYRFI GPRLIDNTPV LFGSFSVVQL NPHLILHTAD VINRHNMKTQ
NLLDDAIKIA IVVSGNAHIS FGHQELHLGE KQPASLIALT EPTMFTRIGK RDEYERTITL
TFDREWLYGN MMDTVGDWQA IHDFTQTHLA THLWTPSRQA LAIALQTLDA EPCQTPLQRL
YLETQCMGLI IEAFTSLTAS VAQEKSSGVT LRGYHRIQQV REMLESGSAD QLSMSEIAKS
VNMSESTLQR HFRQTFNMSV FEYLRNSRLQ RAMLALQKDG IGIAQAASIA GYNSPANFAT
ALRRAFGITP GQLKDRF
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