| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3541 |
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| Symbol | |
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| ID | 8134521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3989469 |
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| End bp | 3989936 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866842 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019093 |
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| Protein GI | 253689903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2731] Beta-galactosidase, beta subunit |
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| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.165984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGCAG GAAACCTAAA CGCCCTCAAA CTCGCTACGC TGCCTGATGC ACTCTGGACC
ATTCTGTCTG CACCCGGTAT GTCGTTAGCT GAACTGAATG CGCTGCCCGA AGGCCGCTAT
CAGCCGGAAG GCGCCGACTG GTTTTACAAC ATCGGTACCG TGAACACCGC ACCGCGTGCC
ACGCGACATA CTGAATTTCA CAGCAACTAC CTCGATATTC AGTTGATTCT GGAAGGCGAG
GAAATTATCG GTTACGGTCT GAATGATGTG CATGGCCAAC CCGCGACCGA GCGTAAGCCG
GATCTCTACA TTCTGGATAA CCCACAGGTG CCGCATCAGA TCCATCTGCG GGCAGGCGAC
TTCGTCACGT TCTATCCGGG CGAAGCCCAT CAGGCGCTGT GTGCGATTAA CGACAGCCCT
GCTCCGGTCA AAAAAGCCGT GTTTAAAATT CCCGTCGCGT TGTTGTAA
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| Protein sequence | MIAGNLNALK LATLPDALWT ILSAPGMSLA ELNALPEGRY QPEGADWFYN IGTVNTAPRA
TRHTEFHSNY LDIQLILEGE EIIGYGLNDV HGQPATERKP DLYILDNPQV PHQIHLRAGD
FVTFYPGEAH QALCAINDSP APVKKAVFKI PVALL
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