| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3538 |
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| Symbol | |
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| ID | 8134518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3985878 |
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| End bp | 3986762 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866839 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_003019090 |
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| Protein GI | 253689900 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.423247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA ATATTACCGG CGTCCTGACC GCCATCGTCA CGCCGTTTGA TAACCAGGGC
GAATTTAACC CCGCTGCCAT GCGTCTTCAG GTTCAGCGCC AGATGCGCTA TGGCAACGGT
ATCTTTTGTA ACGGCACCAA CGGTGAGTTT TTCGTACTGC ACACCGATGA AAAAGTCGCC
GTCACTGAAA CCTGCGTTGA TGAAGTCGCC GGAAAAGTGC CGGTTGTCGG CCACATCGGT
GAAATCTCCA CGCGGGAAAC CATCAAGCTC GGCAAGCGCA TCGCCGCGCT GGGTGTTGAT
GCCGTTTCGG TCATCACCCC GTATTTCATC CCACTCAAAC AGGAAGAACT GATCGCCCAC
TACACCGCCG TCGCCGATGC GCTGACTGTG CCGGTGTTTC TCTACAACAT TCCTGCACGC
ACGGGGAATA CGCTGGCGCC GGAAACCGTC CGCACGCTGG CGGATCACCC GAACATCATC
GGCATCAAAG ACAGCGCAGG CAGCTATGAA AGCCTGAGCG GCTATGTGCA AGCGGTGAAA
GGTGTACAGG GCTTTAACGT ATTGAATGGC CCAGACTCGC TCATTCACCA GGGCTTTGTT
GACGGCTGCT CCGCCTGTAT TTCCGGGCTG GCTAACGTGG CACCGGAACC GATCAGCCAG
ATTTGGCATC GTTTCCACGC CGGTGACATT GAAGGCTCGC GTCAGGCACA AGAACAGGTT
GCCGAGTTGC GTAAGACACT GTATGCCATC GCATTCTCAC CTGCTGTGGT GAAAAAAGCG
CTGGCGATCA TGGGTGAAGA TGTCGGCGTC AGCCGCTATC CGATCCAGTT TTCCGCACAG
GATGAAGACA ACATCCGCAA CATACTTAGT CAATTCTCGC AGTAA
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| Protein sequence | MSKNITGVLT AIVTPFDNQG EFNPAAMRLQ VQRQMRYGNG IFCNGTNGEF FVLHTDEKVA
VTETCVDEVA GKVPVVGHIG EISTRETIKL GKRIAALGVD AVSVITPYFI PLKQEELIAH
YTAVADALTV PVFLYNIPAR TGNTLAPETV RTLADHPNII GIKDSAGSYE SLSGYVQAVK
GVQGFNVLNG PDSLIHQGFV DGCSACISGL ANVAPEPISQ IWHRFHAGDI EGSRQAQEQV
AELRKTLYAI AFSPAVVKKA LAIMGEDVGV SRYPIQFSAQ DEDNIRNILS QFSQ
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