Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3535 |
Symbol | pdxA |
ID | 8134515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3982139 |
End bp | 3983119 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866836 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase 2 |
Protein accession | YP_003019087 |
Protein GI | 253689897 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAAAA TTATTGCGGT AACGATGGGT GATCCGGCAG GGATTGGACC GGAAATTATT ATCAAGTCGC TGGCCGAGGG CGAGCTTTCC GGCGCGTCTG CCGTGGTGGT GGGCTGCGTA CAGACGATGC AACGTATTCT GGCGCTGAAT GTTGTGCCAG CCGTAGAGCT GAAAATCATT GATAAACCCG CTGACGCGGT CTTCGCGCCA GGCGTCATCA ACATCATTGA TGAGCCGCTG GAAGATCCGC AGGCGCTGAA GCCGGGGGTC GTTCAGGCAC AGGCGGGTGA TTTGGCTTAT CGCTGCATCA AGAAAGCGAC TGCATTGGCG ATGGCCGGTG AGGTCCACGC GATTGCGACG GCACCGCTGA ATAAAGAAGC GCTGCACTCG GCGGGGCATA TTTATCCGGG TCACACCGAG CTGCTGGCGA AGCTGACCAA CAGCCGCGAC TATGCGATGG TGCTGTATAC CGATAAATTG AAGGTGATCC ATGTTTCAAC GCACATCGCG CTGCGTAAAT TCCTGGATAC GCTGAACCGC GAGCGCGTGG AAACGGTGAT CGACATGGCG GATGTCTTCC TCAAGCGCGT CGGTTTTACC CACCCACGTA TCGCCGTTGC CGGGGTTAAC CCGCATGCGG GCGAGAATGG TCTGTTTGGT GACGAAGAGA TCAAAATTGT GTCGCCATCG GTTGAAGCCA TGAAGGCCAA AGGCATTGAT GTTTATGGCC CGTGCCCGCC GGATACCGTC TATTTGCAGG CGTATGAAGG TCAGTACGAC ATGGTAGTGG CAATGTATCA CGATCAGGGA CACATTCCGC TCAAGCTGCT GGGCTTCTAT GATGGGGTGA ACATCACTGC CGGATTGCCG TTTATCCGCA CCTCTGCTGA CCACGGCACG GCGTTTGACA TTGCCTGGAC CGGTAAAGCG AAGTCCGAAA GCATGGCGAT CTCTATCCAG CTCGCGATGC AACTGGCCTG A
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Protein sequence | MSKIIAVTMG DPAGIGPEII IKSLAEGELS GASAVVVGCV QTMQRILALN VVPAVELKII DKPADAVFAP GVINIIDEPL EDPQALKPGV VQAQAGDLAY RCIKKATALA MAGEVHAIAT APLNKEALHS AGHIYPGHTE LLAKLTNSRD YAMVLYTDKL KVIHVSTHIA LRKFLDTLNR ERVETVIDMA DVFLKRVGFT HPRIAVAGVN PHAGENGLFG DEEIKIVSPS VEAMKAKGID VYGPCPPDTV YLQAYEGQYD MVVAMYHDQG HIPLKLLGFY DGVNITAGLP FIRTSADHGT AFDIAWTGKA KSESMAISIQ LAMQLA
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