Gene PC1_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3535 
SymbolpdxA 
ID8134515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3982139 
End bp3983119 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content56% 
IMG OID644866836 
Product4-hydroxythreonine-4-phosphate dehydrogenase 2 
Protein accessionYP_003019087 
Protein GI253689897 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAA TTATTGCGGT AACGATGGGT GATCCGGCAG GGATTGGACC GGAAATTATT 
ATCAAGTCGC TGGCCGAGGG CGAGCTTTCC GGCGCGTCTG CCGTGGTGGT GGGCTGCGTA
CAGACGATGC AACGTATTCT GGCGCTGAAT GTTGTGCCAG CCGTAGAGCT GAAAATCATT
GATAAACCCG CTGACGCGGT CTTCGCGCCA GGCGTCATCA ACATCATTGA TGAGCCGCTG
GAAGATCCGC AGGCGCTGAA GCCGGGGGTC GTTCAGGCAC AGGCGGGTGA TTTGGCTTAT
CGCTGCATCA AGAAAGCGAC TGCATTGGCG ATGGCCGGTG AGGTCCACGC GATTGCGACG
GCACCGCTGA ATAAAGAAGC GCTGCACTCG GCGGGGCATA TTTATCCGGG TCACACCGAG
CTGCTGGCGA AGCTGACCAA CAGCCGCGAC TATGCGATGG TGCTGTATAC CGATAAATTG
AAGGTGATCC ATGTTTCAAC GCACATCGCG CTGCGTAAAT TCCTGGATAC GCTGAACCGC
GAGCGCGTGG AAACGGTGAT CGACATGGCG GATGTCTTCC TCAAGCGCGT CGGTTTTACC
CACCCACGTA TCGCCGTTGC CGGGGTTAAC CCGCATGCGG GCGAGAATGG TCTGTTTGGT
GACGAAGAGA TCAAAATTGT GTCGCCATCG GTTGAAGCCA TGAAGGCCAA AGGCATTGAT
GTTTATGGCC CGTGCCCGCC GGATACCGTC TATTTGCAGG CGTATGAAGG TCAGTACGAC
ATGGTAGTGG CAATGTATCA CGATCAGGGA CACATTCCGC TCAAGCTGCT GGGCTTCTAT
GATGGGGTGA ACATCACTGC CGGATTGCCG TTTATCCGCA CCTCTGCTGA CCACGGCACG
GCGTTTGACA TTGCCTGGAC CGGTAAAGCG AAGTCCGAAA GCATGGCGAT CTCTATCCAG
CTCGCGATGC AACTGGCCTG A
 
Protein sequence
MSKIIAVTMG DPAGIGPEII IKSLAEGELS GASAVVVGCV QTMQRILALN VVPAVELKII 
DKPADAVFAP GVINIIDEPL EDPQALKPGV VQAQAGDLAY RCIKKATALA MAGEVHAIAT
APLNKEALHS AGHIYPGHTE LLAKLTNSRD YAMVLYTDKL KVIHVSTHIA LRKFLDTLNR
ERVETVIDMA DVFLKRVGFT HPRIAVAGVN PHAGENGLFG DEEIKIVSPS VEAMKAKGID
VYGPCPPDTV YLQAYEGQYD MVVAMYHDQG HIPLKLLGFY DGVNITAGLP FIRTSADHGT
AFDIAWTGKA KSESMAISIQ LAMQLA