| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3534 |
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| Symbol | |
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| ID | 8134514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3981173 |
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| End bp | 3981946 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866835 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003019086 |
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| Protein GI | 253689896 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGGGG ATAAAGTAAG AGGCCAGAGC CGTCTTGATC AGATTATGGA TTATCTGAAA
AGCCATAATC TGGTGACGGT AGATGAGCTG GTGTCTGTGA TCGACGCTTC CCCAGCGACG
ATCCGCCGTG ATTTGATCAA GCTGGATGAA CAGGGCGTGA TTAGTCGCAG TCATGGCGGC
GTGACGCTCA ATCGTTTTAT TCCTTCCCAG CCGACCACGA ATGAAAAATT ACAGCGCAGT
CTTCAGGAGA AGCAGGCGAT AGCTCGCTAT GCCGCGACGC TGGTTAAACC GGGTAGCGCG
GTAGTGCTGG ATGCGGGAAC GACCATGCTG GAGTTGGCGC GTCACCTGAC GCATTTGCCG
CTGCGCGTGA TTACCGCCGA TTTACAAATT GCGCTGTTCC TGTCTGAGTT CAAACAAATT
GAAGTGACGA TTATCGGTGG GCGTATTGAT GACAGTAGCC AGTCTTGTAT TGGTGAACAC
GGCCGCCGTC TGTTACGCAG CATTTATCCC GATATCGCGT TTATCAGCTG TAACTCGTGG
AGTCTGGATA AAGGGATCAC TACGCCAACG GAAGAAAAAG CGGGTGTGAA ACAGGATCTC
GGCGTGAATG CCAGCCGCCG GATACTGCTG GCGGACAGCA GTAAATACGG CGCCTATTCG
CTGTTCTGCG TGACGCCGCT GTCTGAACTG ACCGATATCA TCACCGATAG TGCGCTCGCG
CCCGAGGTGC AGGAGCAACT GAAAGGTAAA ACGTTCAGTC TGACGCTGGT GTAA
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| Protein sequence | MSGDKVRGQS RLDQIMDYLK SHNLVTVDEL VSVIDASPAT IRRDLIKLDE QGVISRSHGG
VTLNRFIPSQ PTTNEKLQRS LQEKQAIARY AATLVKPGSA VVLDAGTTML ELARHLTHLP
LRVITADLQI ALFLSEFKQI EVTIIGGRID DSSQSCIGEH GRRLLRSIYP DIAFISCNSW
SLDKGITTPT EEKAGVKQDL GVNASRRILL ADSSKYGAYS LFCVTPLSEL TDIITDSALA
PEVQEQLKGK TFSLTLV
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