Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3531 |
Symbol | |
ID | 8134511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3978790 |
End bp | 3979644 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644866832 |
Product | ABC-3 protein |
Protein accession | YP_003019083 |
Protein GI | 253689893 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGTTAT TTCACCTTAT TGCTTCTCCT TTTGCCGAGT TCGGTTTTAT GCGTCGGGCG CTAGTCGGCT GTCTGGTCAT CACGCTGAGC GCCGCGCCGC TGGGCTGTTT CCTGCTGCTG CGGCGCATGA GCCTGATTGG CGATGCCCTG TCGCACGCGG TCTTACCCGG CGTCGCTATC GGCTATCTCA TCTCCGGGAT GTCGCTGCTG GCGATGGGAA TCGGCGGCTT TATTGCCGGA TTGTCCGTCG CCATGCTCTC CGGCTTCGTC ACCCGCCATA CAGAATTAAA AGAGGACGCC AGTTTCGCTG GGTTTTACCT CGGTTCGCTG GCACTCGGGG TCACGCTGGT GTCACTGCGC GGCTCCAGCG TCGATCTGCT GCACGTACTG TTCGGATCGA TTCTCGCGGT GGATCGCGCC GCGCTGATCG ACATTGCGTT GATCGGATCC ACCTCCCTGC TGGTACTGGC GGTGATCTAT CGGGCGCTGG TGATTGAATC GTTTGACGTG ATCTTCCTTC GCATGAGTTC AGGACGCTAT CGGGCGTTGA TCCACGGGCT GTTTCTGTCG CTGGTGGTGC TGAATCTGGT CGCCGGGTTC CAGCTGTTAG GCACGCTGAT GACAGTCGGC ATGATGATGC TGCCTGCCGC CAGCGCACGG TTCTGGACGC AGCGCCTGCC CGTCATGCTC GGCATTGCGG TACTGCAAGG AATGGCCGCC AGCCTGATTG GTCTGCTGTG GTCTTACTAT GCCGAGCTGC CTGCCGGGCC AGCCATCATC CTGACGATTA CGCTGTTTTT CTGTTTCTCG GTCTGTGTGG GTCACAACGG TGGGCTGTTA CGCCAGCGTC GTTGA
|
Protein sequence | MMLFHLIASP FAEFGFMRRA LVGCLVITLS AAPLGCFLLL RRMSLIGDAL SHAVLPGVAI GYLISGMSLL AMGIGGFIAG LSVAMLSGFV TRHTELKEDA SFAGFYLGSL ALGVTLVSLR GSSVDLLHVL FGSILAVDRA ALIDIALIGS TSLLVLAVIY RALVIESFDV IFLRMSSGRY RALIHGLFLS LVVLNLVAGF QLLGTLMTVG MMMLPAASAR FWTQRLPVML GIAVLQGMAA SLIGLLWSYY AELPAGPAII LTITLFFCFS VCVGHNGGLL RQRR
|
| |