Gene PC1_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3530 
Symbol 
ID8134510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3978083 
End bp3978793 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content57% 
IMG OID644866831 
ProductABC transporter related 
Protein accessionYP_003019082 
Protein GI253689892 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCC TACAGGAACT GGCCTTTGGC TATCGTAATC AGCCGCCTCT CGCGACAATC 
AGCGGATGTT TCCATCAGGG ATCGCTGACG GCGATTATCG GCGCAAACGG CTGCGGAAAA
TCGACGCTGC TGAAAACGCT GGCTGGCCTG CTGCCACCGC TTTCCGGATC ATTCCGCCTC
GGTGATAGCA GCAAAAACAA TGCTATCGGC TATTTGCCAC AGCTCTCCGA ATTCGATCGA
CAGTTTCCTA TCAGCGTACG CGATCTGGTT CTCATGGGGT CACTGCCACA TCGCGGCTTG
CTGCGGAGTA TCAACGCCAA ATGGTACCGA AAAGCGACCG ATGCGCTCGA CGCCGTCTCT
ATGGCGGACT TCGCTGACCG ACATATTGGC GTCCTGTCCG GTGGGCAGCT ACAGCGCGTG
CTTTTCGCGC GGCTACTGCT GACACAGGCT CCCATCATTC TGTTGGATGA GCCTTTTACT
GGCGTGGATA GCCAAACCAC GCAGGCGCTT TTACAAACGA TCGAGCAGCT TCACGCCGAA
GGCCGAACCA TTCTGGCCGT TTTGCACGAT CTGGAACTGG TCGGTCAGCA CTTCCCGAAC
ATCCTGCAGC TCACCCCGGA CGGCCATCGC TGGGGGGATG CTCAGCCCAT ATTACACAGC
CTGCGCAAGG CCGACAGCGA TACGCCAACG CTCAGGATCA TTACGTCATG A
 
Protein sequence
MIALQELAFG YRNQPPLATI SGCFHQGSLT AIIGANGCGK STLLKTLAGL LPPLSGSFRL 
GDSSKNNAIG YLPQLSEFDR QFPISVRDLV LMGSLPHRGL LRSINAKWYR KATDALDAVS
MADFADRHIG VLSGGQLQRV LFARLLLTQA PIILLDEPFT GVDSQTTQAL LQTIEQLHAE
GRTILAVLHD LELVGQHFPN ILQLTPDGHR WGDAQPILHS LRKADSDTPT LRIITS