Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3530 |
Symbol | |
ID | 8134510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3978083 |
End bp | 3978793 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866831 |
Product | ABC transporter related |
Protein accession | YP_003019082 |
Protein GI | 253689892 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCCC TACAGGAACT GGCCTTTGGC TATCGTAATC AGCCGCCTCT CGCGACAATC AGCGGATGTT TCCATCAGGG ATCGCTGACG GCGATTATCG GCGCAAACGG CTGCGGAAAA TCGACGCTGC TGAAAACGCT GGCTGGCCTG CTGCCACCGC TTTCCGGATC ATTCCGCCTC GGTGATAGCA GCAAAAACAA TGCTATCGGC TATTTGCCAC AGCTCTCCGA ATTCGATCGA CAGTTTCCTA TCAGCGTACG CGATCTGGTT CTCATGGGGT CACTGCCACA TCGCGGCTTG CTGCGGAGTA TCAACGCCAA ATGGTACCGA AAAGCGACCG ATGCGCTCGA CGCCGTCTCT ATGGCGGACT TCGCTGACCG ACATATTGGC GTCCTGTCCG GTGGGCAGCT ACAGCGCGTG CTTTTCGCGC GGCTACTGCT GACACAGGCT CCCATCATTC TGTTGGATGA GCCTTTTACT GGCGTGGATA GCCAAACCAC GCAGGCGCTT TTACAAACGA TCGAGCAGCT TCACGCCGAA GGCCGAACCA TTCTGGCCGT TTTGCACGAT CTGGAACTGG TCGGTCAGCA CTTCCCGAAC ATCCTGCAGC TCACCCCGGA CGGCCATCGC TGGGGGGATG CTCAGCCCAT ATTACACAGC CTGCGCAAGG CCGACAGCGA TACGCCAACG CTCAGGATCA TTACGTCATG A
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Protein sequence | MIALQELAFG YRNQPPLATI SGCFHQGSLT AIIGANGCGK STLLKTLAGL LPPLSGSFRL GDSSKNNAIG YLPQLSEFDR QFPISVRDLV LMGSLPHRGL LRSINAKWYR KATDALDAVS MADFADRHIG VLSGGQLQRV LFARLLLTQA PIILLDEPFT GVDSQTTQAL LQTIEQLHAE GRTILAVLHD LELVGQHFPN ILQLTPDGHR WGDAQPILHS LRKADSDTPT LRIITS
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