Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3527 |
Symbol | |
ID | 8134507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3974189 |
End bp | 3974740 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644866828 |
Product | hypothetical protein |
Protein accession | YP_003019079 |
Protein GI | 253689889 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.333313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATGGC AACTAAGGGA GATCGACATT GATGGCGATC GTCCCTTTGA TCGCACGCGC GAAAGCGCGT TGTGCGAACA ACGCTGGCCG GGGCAAAGCC GCTATCTGCT GGTCACTGGC GGTTTCACCC GTCTGCTGCA CTGGCATGAC GGTCTCCTGA GCTGTCGCGG CGGCGACAGC TTTCCCATCG GCAATCCGGC CAGCCTGTCG AGGCTGGGAC TGTGGGCGGT GCAAGAGATG CTTCAGGCCG TTGAGGGCAT CACGCCGCTT ACGCCACTCA GTGAAGCGCT GTTCCTGCAC TTCGATAAGC ATGTCGATCG GGTGATCGAC TGGTCAAAGC AGGCGCAGGC CGTGGACTAC AGCCTGCTAG GGAAAAGGGT GCTGGCACAC CCGCACGACG CGCTGGCGGT GCAATTGCTG ACCCGCTGCG CTGACGAGCT GACCGTACTG CTCAATAGCC TGCCGGACTC ACCGACTGAC GCCGTCGACC TCAGCGGCGA TCTGGCGGTG GCCTGCCTTC CCTATCTGGA TTCAGGAGCA CGCGCATCAT GA
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Protein sequence | MKWQLREIDI DGDRPFDRTR ESALCEQRWP GQSRYLLVTG GFTRLLHWHD GLLSCRGGDS FPIGNPASLS RLGLWAVQEM LQAVEGITPL TPLSEALFLH FDKHVDRVID WSKQAQAVDY SLLGKRVLAH PHDALAVQLL TRCADELTVL LNSLPDSPTD AVDLSGDLAV ACLPYLDSGA RAS
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