| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3524 |
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| Symbol | |
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| ID | 8134504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3968871 |
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| End bp | 3969977 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644866825 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003019076 |
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| Protein GI | 253689886 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAG GTTCACTTAA CCGACAACAA ACCGAAGCGC TGCTGGCGCA GGTGGCGCGG
GCATTTTGCC GCCTGAAAGC GATCGACAGC GTGACGCAGG ACGACACGCC GGACGCCGGG
CTGACGATTC AATTCGAAGA GTGGGATTGG GAAGTCGGCG TCGGGCTGTA CGGTTTCTGG
AAGTTGGCGC ATCTGACGCA GGACGACACC ATGCTGACGA CGCTAGCGAA CTGGTATCAG
CAAAAACTGG ATGCAGGGTT GCCGCCGCGT CAGATCAACT CAACGGCGCC GATGCTGGTG
CTGGCGTTGC TGTGTCAGGA CAAACCGGAT GCGCCCGCGC AGTGGCGTGA AACCGTGAAC
GATTGGGCGG ACTGGCTGCT GCACTCGCTG CCGAAAACCG AGGACGGCGG CTTTCAGCAT
ACGGTGAAAG AGCGCCCGAA CACCGGGCAA CTGTGGGATG ACACGCTGTT TATGGCCGGT
CTGTTTCTGG TGGTCGCGGG GAAATTGCTT TCTCGCCGCG ATCTGATTGA AGAGGCGGAA
TACCAGCTCG TTACGCATGC GCGCTATCTG GCCGATGTGC GTAGCGGGCT GTGGTATCAC
GGCTGGACGT TCGTCGGCCG TCATCACTAT GCCAATGCAT TCTGGGGGCG CGGTAATGCC
TGGATCACGC TGGTGCTGCC GGAAATGCGG GTGCTGGCGG AAGATGAGCT GTCCGCGCCG
GTACTGCGCA CGCTGGAAGC GATTCTGGAA CAGCAAACGA CCACGCTGGC GCGCTGCCAG
CACGAGTCCG GCCTGTGGCA CACGCTGCTG GATGACCCGG ATTCACCGCT GGAGACCTCC
GCCAGCGCCG GATTTATCGC TGGCATTCTG ACGGCGCGTC GGCTGGGGAT GCTGCACGAT
TTCCCGCAGG ACGTACTGGA AAAAGGCTAT GCCGCCGTGG TGGCGCAGAT TGACGCACAG
GGCGTGGTGC AGGGTGTCTC GGACGGCACG GCGATGGGAC ATGATTTACA GTTCTATCGC
GATATTCCCA ATGTTGCCGT GCCTTACGGG CAGGCGCTGG TCATGCTGAT GTTATTGGCA
CAGTTAGATT CTGTTTGCGA GGGCTGA
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| Protein sequence | MQTGSLNRQQ TEALLAQVAR AFCRLKAIDS VTQDDTPDAG LTIQFEEWDW EVGVGLYGFW
KLAHLTQDDT MLTTLANWYQ QKLDAGLPPR QINSTAPMLV LALLCQDKPD APAQWRETVN
DWADWLLHSL PKTEDGGFQH TVKERPNTGQ LWDDTLFMAG LFLVVAGKLL SRRDLIEEAE
YQLVTHARYL ADVRSGLWYH GWTFVGRHHY ANAFWGRGNA WITLVLPEMR VLAEDELSAP
VLRTLEAILE QQTTTLARCQ HESGLWHTLL DDPDSPLETS ASAGFIAGIL TARRLGMLHD
FPQDVLEKGY AAVVAQIDAQ GVVQGVSDGT AMGHDLQFYR DIPNVAVPYG QALVMLMLLA
QLDSVCEG
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