| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3513 |
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| Symbol | |
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| ID | 8134493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3958191 |
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| End bp | 3960017 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866814 |
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| Product | Amidohydrolase 3 |
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| Protein accession | YP_003019065 |
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| Protein GI | 253689875 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA ATAGTGCGCT TCGCGCCAAT AACAAAAAGC TATCCCACAT CCTCGTCAGC
AAGACATCCT TATCCCATTC TGGCAACGCA TCTTTCAGGC TCGCAGCACT TGCTATAACC
GTCTCTGGTT TGCTTTTTGC CTCACCGACA CTCATCGCAG CAGAAACGGC AACGACTGCC
GATTTAGTGT TACGTAACGG TAATATCTAC ACCGTTAATC AAGGCCAGCC GTGGGCAGAA
GCCGTCGCGG TACGCGATGG CCGTTACGTT TTCATCGGTT CAAATGCACA GGCCGCGGAA
TTTATCGGCC CGCAAACACA GGTGGTTGAT CTCGAGGGCA GCATGGCAAT GCCGGGGATT
AATGACGTCC ATGCTCACCC GTTAGACGGC GGCTATGAAG ATATCTACTC CTGTAACTTC
GCGCAAACAA GCTCACTGGA TGACATTCTG AATAAGGTCA GTGAATGCGC GCAAAAAGCC
GGGCCGGGCG AATGGGTGAT AGGGTCTGCC TGGGGTAGCC CGCGTATGGC GGAGCTGTCT
ACCGCTGAAG CCTTGGCGAA ACTGGATAAA GTCAGTAACG GGCGTCCGGT CATTCTGCGT
GATGATTCCT ACCATAACCG CTGGATTAAC AGCGAAGCGA TGCGTTTAGC CACTATCACC
GCCCAGTCAG TTAGTCCAGC CGGAGGCGTT ATTGTAAAAG ACGCCAAAAC AGGCGAGCCT
ACAGGTCTGT TGCAAGAATT CCCCGCGTTC CAGCATGTAC AAAGTCTGGT TCCAGTACGC
ACGGAAGAAC AACGGCTGAC ATCAGGACGC GGTGCCGCAA AAACGATGGT GTCGTTAGGT
ATCACGGGCG TACAGGAAGC GGTCAGTTCT GAAGTGAATC TGCGCATCTG GAGCAAGATT
GACCGGGCAG AAGGCCTGCC TTTACGCATT ATCGGCTCGA TCGTTTCTAC TCCGCTTCTG
GATGAAGGTG CCGCAGGCAT GGAGCTGGTT GCCCGACGCG ACGTCTACCG CACCACCAAC
TTCTTCCCCG ATCGTTTTAA ATTTGTTTTA GATGGCGTCC CGCCAGCCCA TACCGCGAAA
CTGCTTGCCC CCTATTTGCC CACTCAGGCA CATGGCGATC ACTACCACGG TGATACACAC
TACACCACCG AGCAGGTTGT AGAAATTTTA TCCAAGCTGG ATAAACAAGG CATATCAACC
AAGCTTCATG CTGCGGGAGA TGGCTCGCTG CGTCTGGCGC TGGATGCCGT TGAGCAGGTA
CGTAAAATAA ATGGGCCAAA TGGCCCCATG CATCAAATCG CGCATACGCA CCTGATCTCA
CCACAAGATA TGCCACGCTT TGCACAATTG CGGGTAGCTG CCGACCTCTC GCCGATGCTG
TGGTTCCCGT CCGATATGAC AAACGCCAGC GTAGTGACGA TTGGCGAAGA ACGTATGAAG
GATTTTGTCC CCACGGTCAA ATTGCTGCGT TCTGGCGCAG TAGTTGCCGG CGGTTCTGAC
TGGCCCGCAG GTGGCCCAAC ACCGTCTCCC TGGATTGGCA TTGAAGGGCT GGTAACACGT
CAGAACCCGC AGGGTGACGC ACCCGGTACA CTGGCTCCCG AAGAGGCCGT CGATCTGTCT
GAAGCAATTC GTATCTATAC CATCAACAGC GCAAAAGCGA TGGGGATCGA AAAAGAAACA
GGATCGGTAG AACTGGGTAA ATCCGCCGAT CTAATCGTGT TGGATCGTCA CTTATTTAAC
GTACCGATCA AGCAGGTTCA TCGCACCAGC GTGGTCAAGA CGTATTTCAA AGGCCAGCTC
GTGCATTCAG CGCCAGAGAA ATCCTGA
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| Protein sequence | MEKNSALRAN NKKLSHILVS KTSLSHSGNA SFRLAALAIT VSGLLFASPT LIAAETATTA
DLVLRNGNIY TVNQGQPWAE AVAVRDGRYV FIGSNAQAAE FIGPQTQVVD LEGSMAMPGI
NDVHAHPLDG GYEDIYSCNF AQTSSLDDIL NKVSECAQKA GPGEWVIGSA WGSPRMAELS
TAEALAKLDK VSNGRPVILR DDSYHNRWIN SEAMRLATIT AQSVSPAGGV IVKDAKTGEP
TGLLQEFPAF QHVQSLVPVR TEEQRLTSGR GAAKTMVSLG ITGVQEAVSS EVNLRIWSKI
DRAEGLPLRI IGSIVSTPLL DEGAAGMELV ARRDVYRTTN FFPDRFKFVL DGVPPAHTAK
LLAPYLPTQA HGDHYHGDTH YTTEQVVEIL SKLDKQGIST KLHAAGDGSL RLALDAVEQV
RKINGPNGPM HQIAHTHLIS PQDMPRFAQL RVAADLSPML WFPSDMTNAS VVTIGEERMK
DFVPTVKLLR SGAVVAGGSD WPAGGPTPSP WIGIEGLVTR QNPQGDAPGT LAPEEAVDLS
EAIRIYTINS AKAMGIEKET GSVELGKSAD LIVLDRHLFN VPIKQVHRTS VVKTYFKGQL
VHSAPEKS
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