| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3511 |
|---|
| Symbol | uvrA |
|---|
| ID | 8134491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3954332 |
|---|
| End bp | 3957166 |
|---|
| Gene Length | 2835 bp |
|---|
| Protein Length | 944 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644866812 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_003019063 |
|---|
| Protein GI | 253689873 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA TCGAAGTTCG TGGTGCTCGT ACCCATAATC TCAAGAATAT CAACCTGATA
ATCCCTCGTG ACAAGCTGAT CGTGATCACC GGTTTGTCGG GTTCGGGTAA GTCATCGCTG
GCGTTTGACA CGCTGTATGC CGAAGGGCAG CGGCGCTATG TGGAATCCCT CTCTGCTTAC
GCCCGTCAGT TTTTGTCGCT GATGGAAAAA CCGGACGTCG ATCATATAGA AGGGCTATCG
CCCGCCATCT CTATCGAACA GAAATCCACC TCGCATAACC CGCGTTCTAC GGTCGGGACG
ATTACCGAAA TTCATGACTA CCTGCGTTTG CTGTTTGCAC GCGTGGGTGA GCCACGCTGC
CCAGAACATG ATGTGCCGCT GGATGCGCAA ACGGTCAGCC AGATGGTGGA CAACGTGCTG
GCGCAGCCGG AAGGCAAACG TCTGATGCTG CTGGCGCCGA TTGTGAAAGA TCGCAAAGGT
GAACACAGCA AAACGTTGGA AAACCTGGCT TCACAGGGCT ACATCCGCGC CCGTATCGAC
GGGGAAGTGT GCGATCTGTC CGATCCGCCG AAGCTGGAAT TACAGAAAAA GCACACCATT
GAAGTTGTCG TCGATCGCTT TAAAGTGCGT GACGATCTGG CGCAGCGATT GGCTGAGTCG
TTTGAAACCG CGCTGGATCT CTCCGGCGGC AGCGTGGTGG TCGCGGACAT GGACGATCCT
ACCCAGCCTG AACTACTGTT CTCGGCGAAC TTTGCCTGTC CGGTGTGTGG CTACAGCATG
CACGAACTGG AACCACGCAT GTTCTCGTTC AACAACCCGG CGGGCGCGTG CCCAAGCTGT
GATGGTCTGG GCGTGCAGCA ATTCTTCGAT CCGGCCCGCG TAGTGCAAAA CGCGGAATTG
TCGCTGGCGG GCGGCGCGAT TCGTGGCTGG GATCGCCGTA ACTTCTACTA TTTCCAGATG
CTGCGCTCAC TGGCGGAGCA TTACAAATTT GACGTCGATG CGCCGTTTGA AAGCCTGAGC
GCCGCGGTGC AGAAAGTGAT TCTGTACGGC TCTGGTAAAG AGAACGTCGA ATTCAAATAC
ATCAACGATC GCGGTGACAC CTCGGTACGC CGCCATCCGT TCGAAGGCGT GCTGCACAAC
ATGGAACGTC GTTATAAAGA GACGGAATCC ACGGCGGTGC GCGAAGAGCT GGCGAAATTC
ATCAGCAACC GTTCCTGCGC CAGCTGCGGC GGCACACGCC TGCGTGAAGA AGCGCGTAAC
GTATTTGTTG AGCAGACGAC GCTGCCGCAG ATTTCCGATA TGAGCATCGG TCATGCGATG
ACGTTCTTCC AGAATATGAA GCTCAGTGGG CAGCGCGCTC AAATCGCCGA GAAAGTGCTG
AAAGAGATTG GCGATCGGCT GAAGTTTCTG GTGAATGTCG GGCTGAACTA TTTGTCGCTT
TCCCGCTCTG CGGAAACGCT GTCCGGCGGT GAGGCGCAGC GTATTCGTCT GGCGAGCCAG
ATCGGTGCCG GGCTGGTTGG CGTGATGTAC GTACTGGATG AGCCGTCCAT CGGCCTGCAT
CAGCGTGACA ACGAGCGCCT GCTGGAAACG CTGATTCACC TGCGTAATCT GGGCAATACC
GTCATTGTGG TAGAACATGA TGAAGACGCG ATTCGCGCCG CTGACCATGT GATTGATATC
GGCCCCGGTG CGGGCGTGCA TGGCGGCCAG ATTGTCGCTG AAGGCACGAT GGAAGAGATC
ATGGCGGTGC CGGATTCGCT GACGGGGCAG TTCCTCAGCG GTAAACGCAA GATCGAAATC
CCGAAACAGC GCGTGCCTGC GGATCCGACC AAAGTGCTGA AGCTGATTGG TGCGAAGGGG
AACAACCTGA AAGATGTCAC GCTGACGCTG CCGGTTGGGC TGTTTACCTG TATCACCGGC
GTGTCGGGAT CGGGTAAATC GACGCTCATC AACGATACCT TGTTCCCACT GGCGCAGCGT
CAGTTGAACG GTGCGACGCT GGCGGAGCCT GCCGTTCACC GTGAAATTCA GGGATTGGAA
CATTTCGATA AGGTGATCGA TATCGATCAA AGCCCGATTG GCCGTACGCC GCGCTCCAAT
CCGGCGACCT ACACCGGTAT TTTCACGCCG ATTCGTGAGC TGTTTGCCGG CGTGCCGGAA
GCGCGTACTC GCGGCTACAA CCCTGGCCGT TTCAGCTTTA ACGTGCGCGG CGGGCGCTGC
GAAGCCTGCC AGGGCGACGG CGTGATTAAG GTCGAAATGC ACTTCCTGCC GGATGTCTAT
GTGCCGTGTG ACCAGTGCAA AGGCAAGCGC TACAACCGCG AAACGCTGGA AATTCAATAC
AAAGGCAAAG GCATTCATGA AGTGCTGGAT ATGACCATCG AAGAAGCGCG AGAGTTCTTT
GATGCCATTC CGGCGCTGGC ACGGAAGCTG CAAACGCTGA TCGACGTCGG TCTGTCCTAC
ATTCGCCTTG GGCAGTCGGC CACCACGCTA TCCGGCGGGG AAGCGCAGCG TGTGAAACTG
TCGCGCGAGC TGTCAAAACG TGGAACCGGG CAGACGCTGT ATATCCTCGA TGAACCCACA
ACCGGTCTGC ACTTTGCCGA TATTCAGCAG CTTTTGGCTG TGTTGCATCA GTTGCGCGAT
CAGGGCAATA CCATCGTGGT GATTGAGCAC AATCTGGACG TGATTAAGAC GGCAGACTGG
ATTGTCGACT TAGGACCGGA AGGCGGTAGC GGCGGCGGAG AAATTCTGGT CTCTGGCACG
CCGGAAACGG TGGCAGAGTG CGAACAGTCC CATACCGCAC GCTTCCTGCG ACCGATTCTG
GCACGCGAAG CCTGA
|
|---|
| Protein sequence | MDKIEVRGAR THNLKNINLI IPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIHDYLRL LFARVGEPRC
PEHDVPLDAQ TVSQMVDNVL AQPEGKRLML LAPIVKDRKG EHSKTLENLA SQGYIRARID
GEVCDLSDPP KLELQKKHTI EVVVDRFKVR DDLAQRLAES FETALDLSGG SVVVADMDDP
TQPELLFSAN FACPVCGYSM HELEPRMFSF NNPAGACPSC DGLGVQQFFD PARVVQNAEL
SLAGGAIRGW DRRNFYYFQM LRSLAEHYKF DVDAPFESLS AAVQKVILYG SGKENVEFKY
INDRGDTSVR RHPFEGVLHN MERRYKETES TAVREELAKF ISNRSCASCG GTRLREEARN
VFVEQTTLPQ ISDMSIGHAM TFFQNMKLSG QRAQIAEKVL KEIGDRLKFL VNVGLNYLSL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLET LIHLRNLGNT
VIVVEHDEDA IRAADHVIDI GPGAGVHGGQ IVAEGTMEEI MAVPDSLTGQ FLSGKRKIEI
PKQRVPADPT KVLKLIGAKG NNLKDVTLTL PVGLFTCITG VSGSGKSTLI NDTLFPLAQR
QLNGATLAEP AVHREIQGLE HFDKVIDIDQ SPIGRTPRSN PATYTGIFTP IRELFAGVPE
ARTRGYNPGR FSFNVRGGRC EACQGDGVIK VEMHFLPDVY VPCDQCKGKR YNRETLEIQY
KGKGIHEVLD MTIEEAREFF DAIPALARKL QTLIDVGLSY IRLGQSATTL SGGEAQRVKL
SRELSKRGTG QTLYILDEPT TGLHFADIQQ LLAVLHQLRD QGNTIVVIEH NLDVIKTADW
IVDLGPEGGS GGGEILVSGT PETVAECEQS HTARFLRPIL AREA
|
|---|
| |