Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3497 |
Symbol | |
ID | 8134477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3941393 |
End bp | 3942376 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866798 |
Product | quinone oxidoreductase, NADPH-dependent |
Protein accession | YP_003019049 |
Protein GI | 253689859 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAC GCGTTCAGTT CCGAGCTTAT GGTGGCCCAG AGGTTCTGCA ATATGTAGAT TTCACACCGA CTGACCCCGC TGCGGGAGAG GTTCAGGTTG AGAACCGCGC CATCGGCATT AATTTTATCG ATACCTATAT TCGTAGTGGC CTGTATCCGG TGCCTGATTT GCCTTCCGGG CTGGGAACCG AAGCAGCGGG CGTCGTAACC AAAGTCGGCG CGGGTGTTAG CGTGCTGAAA GTGGGCGATC GCGTCGTGTA TGCGCAGTCC GGGCTGGGCG CGTATAGCGA CGTGCATAAC GTGGTGGCGG AGAAGGTTGC GCTGCTGCCG GACGCCATCA GCTTTGAGCA GGCGGCGGCT TCTTTCCTGA AAGGGCTGAC GGTTTATTAC CTGCTGCGTC AGACATATGA AATCAAGCCA AATGAGGTCT TCCTGTTCCA TGCCGCGGCG GGTGGCGTTG GGCTGATTGC CTGCCAGTGG GCGAAAGCGC TGGGGGCGAA GCTGATTGGG ACGGTAGGAT CTGATGAGAA AGCGGAGCGC GCGACACAGG CGGGTGCCTG GGCGACCATC AATTACCGCA CCGAGAATAT TGCGCAGCGT GTCGTGGAAC TGACCGATGG GCAGAAGGTC AACGTCGTAT ATGACTCGGT CGGGAAAGAT ACCTGGGAAG CCTCGCTCGA TAGCCTGCGC CGCCGTGGAT TGATGGTCAG CTTCGGCAAT GCATCTGGGC CGGTTACTGG CGTCAATCTG GGGATTCTGA ACCAGAAAGG TTCGCTGTAC GTCACGCGCC CGTCTTTATT TGGTTACGTA ACGAACCGTG CCGAACTGGA ACAGGCCAGC AATGAACTCT TTTCACTGAT CGCCAGCGGA GCGATTACGG TAGATGTGCC ACAGAACCAG CAATTCGCGC TGTCGGATGC GCAAGCGGCC CATCGTGCGC TGGAAAGCCG CAGCACGCAG GGCTCATGTT TGCTCATACC CTAG
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Protein sequence | MAKRVQFRAY GGPEVLQYVD FTPTDPAAGE VQVENRAIGI NFIDTYIRSG LYPVPDLPSG LGTEAAGVVT KVGAGVSVLK VGDRVVYAQS GLGAYSDVHN VVAEKVALLP DAISFEQAAA SFLKGLTVYY LLRQTYEIKP NEVFLFHAAA GGVGLIACQW AKALGAKLIG TVGSDEKAER ATQAGAWATI NYRTENIAQR VVELTDGQKV NVVYDSVGKD TWEASLDSLR RRGLMVSFGN ASGPVTGVNL GILNQKGSLY VTRPSLFGYV TNRAELEQAS NELFSLIASG AITVDVPQNQ QFALSDAQAA HRALESRSTQ GSCLLIP
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