Gene PC1_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3478 
Symbol 
ID8134458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3922675 
End bp3923328 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID644866779 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003019030 
Protein GI253689840 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA GCACTGCGAT TAAACACGTT ATTTTCGACT GGAATGGCAC GTTGGTCGAT 
GACCTGGCGC TGGCGGTGAA GGGGCTAAAT GCGGTGAGGG AATTACAAAC GCTGCCACCT 
CTCGATGCAA AACGGTATCG CGAGCATTTC GGGTTCCCAA TCCAATCGTT CTATCAGGCG 
GTCGGGATCG ACTGCGAGAG CGGACGATTC GACGATTTGA TCCACACGTA CCTGAGTATT 
TTCAACAGTG AGATCAACCA ATGTCCGCTC CATCAGGGGG CGGTGGATAT CATCAGTATG 
TTGCGACGTA CCGGCGTGAG TATCTCCGTG CTGTCTGCCA GCCAGCACGA GACGTTGCAG 
AATAACCTTG CCAGCGCTGG CATCGATCAC CTGGTCGATC ATGTGTTTGG CCTCACGAAT 
ACCCAGGCTA AAGGCAAGCA GGGTATTGCT GAAGAGCTAG ACTCGGTACT GGGAAATCCG 
GGAACGGCTG CTCTGATGAT CGGTGATACC GACCATGATA TCGATGTCGC ACATGCCTGC 
GGCTGGCAGA TGGCCTCCGT TTCTCACGGC CATCAGACGC ACGAGCGGCT GAGCGCGATT 
CACCCGTTTG TTTTCGGGGA TCTGTCATCG GTATACCGCG CCTATTTCCG CTAA
 
Protein sequence
MKDSTAIKHV IFDWNGTLVD DLALAVKGLN AVRELQTLPP LDAKRYREHF GFPIQSFYQA 
VGIDCESGRF DDLIHTYLSI FNSEINQCPL HQGAVDIISM LRRTGVSISV LSASQHETLQ 
NNLASAGIDH LVDHVFGLTN TQAKGKQGIA EELDSVLGNP GTAALMIGDT DHDIDVAHAC 
GWQMASVSHG HQTHERLSAI HPFVFGDLSS VYRAYFR