Gene PC1_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3473 
Symbol 
ID8134453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3918398 
End bp3919003 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content48% 
IMG OID644866774 
ProductNUDIX hydrolase 
Protein accessionYP_003019025 
Protein GI253689835 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.672777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA CGACTTATGC ACCCTCTGCC ACGACGGCGG TCGTCAATGA CAGCTGGGTA 
TTAGCCAATG ACTGGGGAAA GCTAACCAAA TACGACATCA CGTACACGCG TTCAAACGGA 
ACGGAACAGC GCCTGATTCG TGAAGCCTAT GACCGTGGTC ATGGCGCGAC CATTGGGCTC 
TACAACGCGG ATGCGCGTAC GGTCATTCTC ACCAGCCAGT TTCGTCTGCC AGCCTTTTTG 
ATTGGCCACC ATTATGAGCT TATTGAAGCG TGCGCAGGCC TGTTGGATGA ACGTGACCCG 
ATTCAGGCCA TCAGAAAAGA GGCGGAGGAG GAAACCGGAT ATAAACTCAA TGACGTCACC 
AAAATTGGCG AAATATTCAT GAGTCCCGGA TCTGTGACCG AACGTCTACA CTTCTTTATT 
GCGCCTTTTA CGCATGAGAT GCGAATTAAT GAAGGCGGCG GTATTGCCGA AGAAGGCGAA 
GATATCAAGG TCATGGAAAT TCCGATTAAA GATGCGCTGC AAATGATTGA TGACGGCCAG 
ATTATTGATG CCAAAACCAT TATTTTGCTT CAGCACCTGG TTATTAAAAA TATTTGTAAG 
CCGTAA
 
Protein sequence
MKNTTYAPSA TTAVVNDSWV LANDWGKLTK YDITYTRSNG TEQRLIREAY DRGHGATIGL 
YNADARTVIL TSQFRLPAFL IGHHYELIEA CAGLLDERDP IQAIRKEAEE ETGYKLNDVT 
KIGEIFMSPG SVTERLHFFI APFTHEMRIN EGGGIAEEGE DIKVMEIPIK DALQMIDDGQ 
IIDAKTIILL QHLVIKNICK P