| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3472 |
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| Symbol | |
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| ID | 8134452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3917193 |
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| End bp | 3918368 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866773 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003019024 |
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| Protein GI | 253689834 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.2382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAC AGAGCCTGGT TAAACCCCAA TTCAAACGCG ACTATTACAC GTTCTATTTA
TATATGTTGT CGGTGGTGTG CGGCTTTCAT CAGGCCGTAC CGGGCTCTAT CACCCCTTTC
CTGCGTGATG AATTACAGCT GTCCCGAATC GTGATTGGCT GGCACTTTAG CCTCTACGCC
ATTGGTATGT TTGCGACAGG CTTTATCGTT ACCTACTGTT CCAAAAGGGT CTCGCCAAAA
CGTATTCTGC TCACCAGCTC GTTTGCGGTG ACGATTGCGG TTGCCATTTT CTCCCTTCCG
ATGTCTTCAT CGGCAACGCT GAGCATGTCG CTGGTGTTGG GGCTGGCGGG GGGCGCGATG
CAAATAGCCA TTCAGGAATC GCTGGCACGC CATCATGGTG AAAACAGCGG GGTTGCCATC
ACGGAGGGAT GCATTTTTGC CGCCATTGGG GTCTTTGCAG GGCCGGTTTT TGTCAGCCTC
GCGGTGGAGT TAGGGTGGGG ATGGCGGATG GCGATGTTTG TGCCCATCAT CGCGCTGCTG
CCTCTTCTCT TTATCGCACC CGGGAATCTG TCGCAGGTGC CTGTCAATAT CGCCACGTCA
TCCAGCCACC CTGCGGATAG CTCCCCTCGC TTGCCGCTGG TGGCGTTCCT GATGTTCGGC
ATGATTTTCC TCGGCATCTC AGCAGAATGG GGCATCGGTT TTTGGGGCGC GCAGTTCCTG
GAAGAGCAGT TATCCGTAAC GGTTGCGACC AGCGTGGGGA TGATGTCTGC CTACTTCGGC
GGCACAATTG TCGGGCGGAT TGTGGTGAGC CGTTTGCTGC TGCGTTATGA AATCAACACG
CTCCTGATCG GGGCAATGAT CGTGGGCGGT ATCGGTTTGG TTATTCTGTG GCTGGTTCCC
CATGTCACTG TTGCACTAGT GAGTCTGGCG ATTTTAGGGG CCTGTCTGGG GAATTTTTTC
CCGCTGATAT TATCGGTTGC GACGCAGCAA CCTGCGCAGT TTCTGTCAAA AATCGCGGCG
GGGGCAACCC AGTCGGTAGG ACTGGCGCTC TTACTGGCAC CCCTGTTACT TGGCAAGGTA
GGCGAAGGTA TCGGGCTGGT TGGCGCTATC GGGCTATTGA CCGTGATTCC GCCCGTGATG
CTGGTGGCCT ATCTGCTGTC ACGCAAACTG TCTTAA
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| Protein sequence | MTEQSLVKPQ FKRDYYTFYL YMLSVVCGFH QAVPGSITPF LRDELQLSRI VIGWHFSLYA
IGMFATGFIV TYCSKRVSPK RILLTSSFAV TIAVAIFSLP MSSSATLSMS LVLGLAGGAM
QIAIQESLAR HHGENSGVAI TEGCIFAAIG VFAGPVFVSL AVELGWGWRM AMFVPIIALL
PLLFIAPGNL SQVPVNIATS SSHPADSSPR LPLVAFLMFG MIFLGISAEW GIGFWGAQFL
EEQLSVTVAT SVGMMSAYFG GTIVGRIVVS RLLLRYEINT LLIGAMIVGG IGLVILWLVP
HVTVALVSLA ILGACLGNFF PLILSVATQQ PAQFLSKIAA GATQSVGLAL LLAPLLLGKV
GEGIGLVGAI GLLTVIPPVM LVAYLLSRKL S
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