Gene PC1_3470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3470 
Symbol 
ID8134450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3915319 
End bp3915663 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content56% 
IMG OID644866771 
Productphosphotransferase system PTS lactose/cellobiose-specific IIA subunit 
Protein accessionYP_003019022 
Protein GI253689832 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.718135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACA CAGAGAACCT CCCTGCATTC GATATGGAAC AAACCGTGAT GGAGCTGCTG 
ATCAACGCGG GCGAAGCCCG TTCAAACGCC ATGATGGCGA TTCAGGCCGC GCGCCAACGA
GAATGGCAAC AGGCTGACGA CCTGCTCGCC GCATCGCTCG AAGCGGCTCG TGAGGCTCAC
CGTGTTCAAA CACGGCTGAT CGGCCTGGAC GAAGGGGAAG GAAAGGTGCC CGTCAATCTG
ATCATGGTGC ATGCGCAGGA TCATCTGATG ACCGCGATGC TATGCCGGGA TCTAGCGGAA
GAGATTGTCC TACTACGGCG AGAAATGGCT ACATCACAAA ACTGA
 
Protein sequence
MKDTENLPAF DMEQTVMELL INAGEARSNA MMAIQAARQR EWQQADDLLA ASLEAAREAH 
RVQTRLIGLD EGEGKVPVNL IMVHAQDHLM TAMLCRDLAE EIVLLRREMA TSQN