Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3470 |
Symbol | |
ID | 8134450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3915319 |
End bp | 3915663 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866771 |
Product | phosphotransferase system PTS lactose/cellobiose-specific IIA subunit |
Protein accession | YP_003019022 |
Protein GI | 253689832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1447] Phosphotransferase system cellobiose-specific component IIA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.718135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGACA CAGAGAACCT CCCTGCATTC GATATGGAAC AAACCGTGAT GGAGCTGCTG ATCAACGCGG GCGAAGCCCG TTCAAACGCC ATGATGGCGA TTCAGGCCGC GCGCCAACGA GAATGGCAAC AGGCTGACGA CCTGCTCGCC GCATCGCTCG AAGCGGCTCG TGAGGCTCAC CGTGTTCAAA CACGGCTGAT CGGCCTGGAC GAAGGGGAAG GAAAGGTGCC CGTCAATCTG ATCATGGTGC ATGCGCAGGA TCATCTGATG ACCGCGATGC TATGCCGGGA TCTAGCGGAA GAGATTGTCC TACTACGGCG AGAAATGGCT ACATCACAAA ACTGA
|
Protein sequence | MKDTENLPAF DMEQTVMELL INAGEARSNA MMAIQAARQR EWQQADDLLA ASLEAAREAH RVQTRLIGLD EGEGKVPVNL IMVHAQDHLM TAMLCRDLAE EIVLLRREMA TSQN
|
| |