Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3467 |
Symbol | |
ID | 8134447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3911919 |
End bp | 3912236 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644866768 |
Product | phosphotransferase system lactose/cellobiose-specific IIB subunit |
Protein accession | YP_003019019 |
Protein GI | 253689829 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1440] Phosphotransferase system cellobiose-specific component IIB |
TIGRFAM ID | [TIGR00853] PTS system, lactose/cellobiose family IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TCGTACTGGC TTGCTCGGCA GGCATGTCGA CCTCACTGGT GGTCACCAAG ATGGAGAAAG AAGCGGAAAA TCGGGGGATG GAACTGAAAA TCTACGCGAT CCCCGAACAA AATCTGCGGG ATGAATTGCA GGAGTTCAGC AGCGATATTA TTGCCGTTTT GCTGGGGCCG CAGGTGCGCT TCAAGCTTAA CGAAAATAAA AAGCTGACGG ACAGCTACCA GATTCCTATC GCGGTGATCG ACCCTGTCGC CTACGGCACA TTAAATGGCG CAAAAGTACT GGATCAGGCG CTGAGTTTGG TAGACTAA
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Protein sequence | MKRIVLACSA GMSTSLVVTK MEKEAENRGM ELKIYAIPEQ NLRDELQEFS SDIIAVLLGP QVRFKLNENK KLTDSYQIPI AVIDPVAYGT LNGAKVLDQA LSLVD
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