| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3435 |
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| Symbol | rpsF |
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| ID | 8134415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3879704 |
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| End bp | 3880096 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866736 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_003018987 |
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| Protein GI | 253689797 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0120822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCGT ATTTATGGTT CATCCTGACC AGAGCGAACA GGTTCCGGGC
ATGATCGAGC GCTACACTGC TACCATCACT GGTGCGCAGG GCACGATCCA CCGTCTGGAA
GACTGGGGCC GCCGTCAGCT GGCTTACCCG ATCAACAAAC TGCACAAGGC ACACTACGTT
CTGCTGAACG TTGAAGCGCC GCAGGAAGCG ATCGATGAGC TGGAAACAAA CTTCCGCTTT
AACGATGCCG TTATCCGCAG CATGGTTATG CGCGTTAAGC ACGCGGTAAC TGAAGCATCT
CCAATGGTGA AAGCGAAAGA CGAACGCCGT GAGCGTCGTG AAGATTTCGC TGAAGCTGGC
GATGATGTGG ATGCAGGGGA TTCTGAAGAG TAA
|
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| Protein sequence | MRHYEIVFMV HPDQSEQVPG MIERYTATIT GAQGTIHRLE DWGRRQLAYP INKLHKAHYV
LLNVEAPQEA IDELETNFRF NDAVIRSMVM RVKHAVTEAS PMVKAKDERR ERREDFAEAG
DDVDAGDSEE
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