| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3433 |
|---|
| Symbol | rpsR |
|---|
| ID | 8134413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3879146 |
|---|
| End bp | 3879373 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644866734 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_003018985 |
|---|
| Protein GI | 253689795 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00939921 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAATTC TGCCGTTTCA CCGCGGAAGG CGTTGTAGAG
ATTGATTATA AAGATATCGC TACGCTGAAA AACTATATCA CTGAAAGCGG CAAGATTGTT
CCGAGCCGTA TCACCGGTAC TCGTGCAAAA TACCAGCGTC AGCTGGCCCG CGCTATCAAG
CGTGCGCGTT ACTTGTCTTT GTTGCCGTAC ACTGACCGTC ATCAGTAA
|
|---|
| Protein sequence | MARYFRRRKF CRFTAEGVVE IDYKDIATLK NYITESGKIV PSRITGTRAK YQRQLARAIK
RARYLSLLPY TDRHQ
|
|---|
| |