Gene PC1_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3428 
Symbol 
ID8134408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3876453 
End bp3877073 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content55% 
IMG OID644866729 
Productpeptidyl-prolyl cis-trans isomerase 
Protein accessionYP_003018980 
Protein GI253689790 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00472809 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTC CTTCTTTTGA TAGCGTCGAA GCGCAGGCAA GTTACGGCAT CGGCTTACAG 
GTTGGTCAAC AGTTACAGGA ATCAGGTCTT GAAGGTCTGA TCCCAGAAGC TCTGCTTGCT
GGTCTACGCG ATGCGCTGGA AGGTAATGCG CCTGCGGTGC CTGTGGATGT GGTTCATCGT
GCGCTGCGTG AAATTCACGA GCGTGCTGAT GCGGTACGTC GCGAGCGCCA ACAGGTGCTG
GCGGTAGAAG GCCAGCAGTT TCTGGCTGAA AACGCGCAGA AAGAAGGCGT GAACAGCACG
GAGTCTGGTC TGCAATTCCG TGTGTTGACT CAGGGTGAAG GTGCTATCCC GGCTCGTCAG
GATCGTGTAC GTGTACATTA CACGGGTCGC CTGATTGACG GCAGCGTGTT CGATAGCTCC
GTTCAGCGCG GCCAACCTGC TGAATTCCCG GTAAGCGGTG TAATTCCAGG CTGGATTGAG
GCGCTGACGC TGATGCCAGT CGGCTCCAAA TGGGAACTCT ATATTCCACA CAATCTGGCG
TATGGCGAAC GTGGCGCGGG TGCTTCCATT CCGCCGTTCA GCGCGCTGAT TTTTGAAGTG
GAACTGCTGG AAATTCTGTA A
 
Protein sequence
MTTPSFDSVE AQASYGIGLQ VGQQLQESGL EGLIPEALLA GLRDALEGNA PAVPVDVVHR 
ALREIHERAD AVRRERQQVL AVEGQQFLAE NAQKEGVNST ESGLQFRVLT QGEGAIPARQ
DRVRVHYTGR LIDGSVFDSS VQRGQPAEFP VSGVIPGWIE ALTLMPVGSK WELYIPHNLA
YGERGAGASI PPFSALIFEV ELLEIL