Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3428 |
Symbol | |
ID | 8134408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3876453 |
End bp | 3877073 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644866729 |
Product | peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_003018980 |
Protein GI | 253689790 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00472809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTC CTTCTTTTGA TAGCGTCGAA GCGCAGGCAA GTTACGGCAT CGGCTTACAG GTTGGTCAAC AGTTACAGGA ATCAGGTCTT GAAGGTCTGA TCCCAGAAGC TCTGCTTGCT GGTCTACGCG ATGCGCTGGA AGGTAATGCG CCTGCGGTGC CTGTGGATGT GGTTCATCGT GCGCTGCGTG AAATTCACGA GCGTGCTGAT GCGGTACGTC GCGAGCGCCA ACAGGTGCTG GCGGTAGAAG GCCAGCAGTT TCTGGCTGAA AACGCGCAGA AAGAAGGCGT GAACAGCACG GAGTCTGGTC TGCAATTCCG TGTGTTGACT CAGGGTGAAG GTGCTATCCC GGCTCGTCAG GATCGTGTAC GTGTACATTA CACGGGTCGC CTGATTGACG GCAGCGTGTT CGATAGCTCC GTTCAGCGCG GCCAACCTGC TGAATTCCCG GTAAGCGGTG TAATTCCAGG CTGGATTGAG GCGCTGACGC TGATGCCAGT CGGCTCCAAA TGGGAACTCT ATATTCCACA CAATCTGGCG TATGGCGAAC GTGGCGCGGG TGCTTCCATT CCGCCGTTCA GCGCGCTGAT TTTTGAAGTG GAACTGCTGG AAATTCTGTA A
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Protein sequence | MTTPSFDSVE AQASYGIGLQ VGQQLQESGL EGLIPEALLA GLRDALEGNA PAVPVDVVHR ALREIHERAD AVRRERQQVL AVEGQQFLAE NAQKEGVNST ESGLQFRVLT QGEGAIPARQ DRVRVHYTGR LIDGSVFDSS VQRGQPAEFP VSGVIPGWIE ALTLMPVGSK WELYIPHNLA YGERGAGASI PPFSALIFEV ELLEIL
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