| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3416 |
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| Symbol | |
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| ID | 8134396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3863457 |
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| End bp | 3865172 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866717 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003018968 |
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| Protein GI | 253689778 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGCGT TGCTCATGTT GGCACCGGAG AGCCAGGCGG CGAATGTGCG CTTGCAAGTC
ATGGGGCTGG AAGGGCAGCT ACAAAAAAAT GTTCGGGCAC GTTTATCGAC CATTGCGGTT
GATGAGGTGA ATGCCGACGG GCGTTTCCGC TCGCGCGTCG ATGAAGCGAT CCGTCAGGGA
TTGCGCGCGC TTGGCTATTA CGATCCACAG ATTGGCTTTG AATTCCGGCC TGCCGTTAAT
GGCGGGCGAC CCGTATTAAT TGCTACCGTC ACCCCCGGCG AACCGGTAAA AATTGCCGGA
GTGAACATCA CCCTACGCGG TGGCGCGCAT GACGATAAAG ACTACCAGCA GCTGGTTAAA
GACGATCGCC CTGAAATCGG ATCGGTGCTG AACCACGGCG ATTTCGATCG CTTTAAAAGC
GGGTTGAACG GTTTGTCATT ACGCAAAGGC TATTTCGATG CGCGCTTCCA GCAAAGCCAG
CTTGGCGTTA TGCGGGAAGA GAGAGAAGCG TTTTGGGATA TCGATTTTGA TAGCGGTGAA
CGCTATCGCT TTGGCGCCGT ACATTTTCAG GGTGCACAAA TCCGCGATGA TTATCTGCAA
AATCTGGTGC CGTTTCATGA AGGCGATGCC TACACCAGTG AAGATCTCGG TGAGTTAAAC
CGTCGTCTTT CTGCGACGGG ATGGTTTAAT TCTGTCGTGG TCTCACCCGA TTTCGATCAG
TCGAAAAGCT CCAAGGTGCT GCCGCTGGAA GCCGTGGTGA CGCCGCGAAC CCGTAACCGC
ATCGAAACTG GGGTGGGGTA CGCGACCGAT GTCGGTCCGC GCTTTAAAAC CACCTGGAAT
AAGCCTTGGG TGAATTCGCG GGGCCACAGT CTGGAAAGCA GCCTGAGTGT GTCTGCACCG
GAGCAATCGC TTGATTTTAG CTACAAAATC CCCTTATTGA AGAACCCGCT AGAGCAGTAT
TACCTGCTGC AAGGCGGCTT CAAGCGCGAA GATCTCAACG ACACCAAATC CGATGGCACC
ACGTTGAACG TGGCACGCTA CTGGGATCTC TCCAGCGGTT GGCAACGGGC GATTAATCTG
CGCTGGAGCC TCGACCACTT TACGCAGGCG AGCGTGACGG ATACCACGAT GCTGATCTAT
CCGGGCGTCA GCATTAACCG AACCCGTCAA CGCGGCGGGC TGATGCCGGT GTGGGGCGAC
ACGCAGCGCT ATTCCATCGA TGTTTCAGAC ACCCTCTGGG GATCGGATAT CGATTTTGCC
GTGGTTCAGG CGCAAAACGT TTGGATTCGT ACGCTGGCGG ACAAACACCG CTTTGTCGCG
CGCGGCAATC TGGGCTGGAT TGAGACCAAT AATTTCTCCC GTGTCCCGCC CTCACTGCGT
TTCTTTGCCG GTGGCGATCG CAGCATTCGT GGATATAAAT ACAAATCGAT TTCGCCGCGC
GACAGCGACG GTAAACTGAC CGGTGCGTCC AAGCTGGCGA CCGGCTCGCT CGAATACCAA
TACAACGTAA CGGGAAAATG GTGGAGCGCG GTTTTTGTTG ATTCAGGTGA AGCAGTGAAT
GACATCAAAC GGAGTAATTT CAAGACCGGT TCGGGCGTCG GCGTACGCTG GGCCTCGCCG
ATTGGCCCGG TGAAACTCGA TGTTGCCATG CCGATCGGCG ATGCAGAGAA GAAGAACGAT
GTTCAGTTCT ATATCGCGCT GGGGCCTGAA TTATGA
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| Protein sequence | MCALLMLAPE SQAANVRLQV MGLEGQLQKN VRARLSTIAV DEVNADGRFR SRVDEAIRQG
LRALGYYDPQ IGFEFRPAVN GGRPVLIATV TPGEPVKIAG VNITLRGGAH DDKDYQQLVK
DDRPEIGSVL NHGDFDRFKS GLNGLSLRKG YFDARFQQSQ LGVMREEREA FWDIDFDSGE
RYRFGAVHFQ GAQIRDDYLQ NLVPFHEGDA YTSEDLGELN RRLSATGWFN SVVVSPDFDQ
SKSSKVLPLE AVVTPRTRNR IETGVGYATD VGPRFKTTWN KPWVNSRGHS LESSLSVSAP
EQSLDFSYKI PLLKNPLEQY YLLQGGFKRE DLNDTKSDGT TLNVARYWDL SSGWQRAINL
RWSLDHFTQA SVTDTTMLIY PGVSINRTRQ RGGLMPVWGD TQRYSIDVSD TLWGSDIDFA
VVQAQNVWIR TLADKHRFVA RGNLGWIETN NFSRVPPSLR FFAGGDRSIR GYKYKSISPR
DSDGKLTGAS KLATGSLEYQ YNVTGKWWSA VFVDSGEAVN DIKRSNFKTG SGVGVRWASP
IGPVKLDVAM PIGDAEKKND VQFYIALGPE L
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