Gene PC1_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3413 
Symbol 
ID8134393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3858441 
End bp3858971 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content51% 
IMG OID644866714 
Productinorganic pyrophosphatase 
Protein accessionYP_003018965 
Protein GI253689775 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.785492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTGA ACGATGTTCC GGCAGGTAAA GATCTGCCAG AAGATATCTA TGTAGTGATT 
GAAATCCCTG CGAATGCCGA TCCAATCAAA TATGAAATTG ATAAAGATAC CGGCGCGCTG 
TTTGTAGACC GTTTCATGTC TACCGCCATG TTCTATCCGT GCAACTACGG CTACATCAAC 
CACACGCTGT CTCTGGATGG CGACCCGGTT GACGTTCTGG TTCCAACGCC GTATCCGCTG 
CAGCCGGGCT CAGTGATCCG TTGCCGTCCT GTTGGCGTGC TGAAAATGAC CGACGAAGCG 
GGCGAAGATG CCAAGCTGGT TGCCGTTCCG CACAGCAAGC TGACCAAAGA ATACGATCAC 
ATTAAAGACG TTAACGACCT GCCTGAACTG CTGCGTGCAC AGATCGGCCA CTTCTTTGAA 
CACTACAAAG ATCTGGAAAA AGGCAAGTGG GTAAAAGTAG AAGGTTGGGA CAACGCTGCA 
GCGGCAAAAG CCGAGATCGT TGCCTCCTTC GAGCGCGCGA AAAACAAATA A
 
Protein sequence
MSLNDVPAGK DLPEDIYVVI EIPANADPIK YEIDKDTGAL FVDRFMSTAM FYPCNYGYIN 
HTLSLDGDPV DVLVPTPYPL QPGSVIRCRP VGVLKMTDEA GEDAKLVAVP HSKLTKEYDH 
IKDVNDLPEL LRAQIGHFFE HYKDLEKGKW VKVEGWDNAA AAKAEIVASF ERAKNK