Gene PC1_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3411 
Symbol 
ID8134391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3855655 
End bp3856290 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID644866712 
Productputative glycerol-3-phosphate acyltransferase PlsY 
Protein accessionYP_003018963 
Protein GI253689773 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0338117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTA CCGCGCTTGG TATGATGTTA ATCGCGTATC TGTGTGGCTC TATTTCCAGT 
GCGATTTTGT TCTGCAGAAT AGCTGGGCTA CCAGACCCGC GTCAGCATGG TTCCGGGAAC 
CCCGGAGCCA CTAACGTATT GCGTATTGGC GGCAAGGCTG CCGCTGCGAC CGTATTGGTT 
TTTGATGTCC TGAAAGGCAT GTTGCCAGTC TGGGCCGCTT ACGCACTGGG CGTCTCCCCG 
TTGTATCTCG GGTTAACTGC CATTGCGGCC TGCCTCGGTC ATATCTATCC AGTCTTTTTT 
CACTTTCGCG GCGGCAAAGG TGTGGCAACG GCTTTTGGCG CCATCGCGCC GATCGGCTGG 
GATCTGACGG GCCTGATGAC TGGGACCTGG CTACTGACCG TCCTGCTGAG CGGCTATTCC 
TCACTCGGCG CCATCGTCAG TGCGCTCATC GCCCCGTTTT ACGTTTGGTG GTTCAAGCCA 
CAGTTTACGT TTCCCGTTGC GATGCTCTCT TGTCTGATAC TGATGCGTCA TCACGACAAT 
ATCCAACGTC TGTGGCGCGG GCAGGAAAGC AAAATCTGGA ACAAGCTGCG GAAGAAGAAA 
CAGCCAGAAG ACGAGAAAAC GTCTCCCGAA GAGTAA
 
Protein sequence
MSVTALGMML IAYLCGSISS AILFCRIAGL PDPRQHGSGN PGATNVLRIG GKAAAATVLV 
FDVLKGMLPV WAAYALGVSP LYLGLTAIAA CLGHIYPVFF HFRGGKGVAT AFGAIAPIGW 
DLTGLMTGTW LLTVLLSGYS SLGAIVSALI APFYVWWFKP QFTFPVAMLS CLILMRHHDN 
IQRLWRGQES KIWNKLRKKK QPEDEKTSPE E