Gene PC1_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3407 
Symbol 
ID8134387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3852068 
End bp3852688 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID644866708 
Productputative signal transduction protein 
Protein accessionYP_003018959 
Protein GI253689769 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000592786 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAT TAGGCTTACT CTGTTTTACT TTATTTTCTC TCACGCTGAG CTGGACCGCA 
CAGGCGGAAG AAAAACGCTA TATTTCCGAT GAGTTATTGA CGTATGTCCA CAGCGGGCCG 
GGCAATCAAT ATCGTATCGT CGGCACACTG AATGCAGGTG CAGAGGTCAC GTTGCTCAGC 
GTTAATGAAA ACGCGGGCTA TGCGCAGATC CGTGATGACA AAAACCGCAC CACCTGGATC 
CCTCTTGACC AGCTTAGCAA TACGCCAAGC CTGCGCACGC GGGTACCGGA GCTGGAAAAT 
CAGGTTAAAG ACCTGACGGA CAAACTGAAT AATATCGATC AGACCTGGAA CCAGCGTACC 
GCTGATATGC AGCAGAAAGT CGCTGCCAGC GATGGTGTTA TTAACGGATT GCGTCAGGAA 
AACCAGGATC TGAAAAATCA GCTTATCGTT GCGCAGAAGA AAGTCAGCGC GGCGAATGTC 
CAGCTTGATG ATAAGCAGCG CACCATTATT CTACAGTGGT TTATGTATGG CGGCGGAGTT 
GCCGGCATAG GCTTGTTGCT GGGTCTGCTG TTACCGCACA TCATCCCCCG CAAAAAGAAA 
AATGACCGCT GGATGAGCTA A
 
Protein sequence
MQKLGLLCFT LFSLTLSWTA QAEEKRYISD ELLTYVHSGP GNQYRIVGTL NAGAEVTLLS 
VNENAGYAQI RDDKNRTTWI PLDQLSNTPS LRTRVPELEN QVKDLTDKLN NIDQTWNQRT 
ADMQQKVAAS DGVINGLRQE NQDLKNQLIV AQKKVSAANV QLDDKQRTII LQWFMYGGGV 
AGIGLLLGLL LPHIIPRKKK NDRWMS