| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3395 |
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| Symbol | |
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| ID | 8134375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3833212 |
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| End bp | 3834552 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866696 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_003018947 |
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| Protein GI | 253689757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGC AAAGTTCAAC GCCGGTTATT ACTCACATGC AAGTTATCCC GGTTGCAGGT
CACGACAGTA TGCTGCTCAA CCTGAGCGGC GCACATGCAC CTTATTTCAC TCGCAACATT
GTGATTCTGA AAGATAACGC CGGGAATACC GGTGTCGGTG AAATACCCGG TGGTGAGAAA
ATCCGTCAGA CGCTGGAAGA TGCTGCGGCG CTGGTGGTGG GTAAAACGCT GGGCGAATAC
AAAAACGTGA TGACGGCGGT GCGTGAGCAG TTCGCCGACC GTGATTCCTC CGGGCGCGGC
TTGCAGACGT TCGATCTGCG TACCACCATC CATGTCGTCA CGGGGATAGA AGCCGCGATG
CTCGATCTGC TGGGGCAGTT CCTCAATGTC AGCGTGGCTT CGCTGCTGGG CGACGGTCAA
CAGCGTGATG CGGTAGAAAT GCTGGGCTAT CTGTTCTACA TCGGCGATCG TAATAAAACC
GATCTGCCTT ATCAGAGCCA GACGAATGAG AAGTGTGACT GGTATCGTCT GCGTCATGAA
GAAGCGTTGT CTCCAGAAAC CATCGTACGT CTGGCTGAGG CGGCGTATGA AAAATACGGT
TTCAATGATT TCAAACTGAA AGGCGGCGTA CTGGCCGGAA GTGAAGAAGC CGAAGCGGTG
ACCGCGCTGG CTAAGCGTTT CCCGCAGGCG CGTATCACGC TGGATCCAAA TGGGGCCTGG
TCGCTGGATG AAGCTATCGG TCTGGGCAAA CAGCTGCGCG GTGTGCTGGC GTATGCGGAA
GATCCGTGCG GTGCGGAACA AGGTTTCTCC GGCCGTGAAG TGATGGCGGA GTTCCGCCGT
GCGACAGGGC TGCCCACCGC GACCAACATG ATCGCCACCG ACTGGCGGCA GATGGGTCAC
ACTATTTCGC TGCAATCGGT CGATATCCCG CTGGCCGATC CGCACTTCTG GACGATGCAA
GGTTCCGTAC GTGTCGCGCA GATGTGCCAC GAATGGGGCT TAACCTGGGG TTCTCACTCC
AATAACCACT TTGATATTTC ACTGGCCATG TTTACCCAGG TCGCTGCGGC GGCGCCGGGC
AAGATTACGG CGATTGATAC GCACTGGATC TGGCAGGAAG GCAACCAGCG CCTGACGAAA
GAACCGTTGC AGATTGTTGG CGGCATGGTG GAAGTGCCGA AGAAACCGGG TCTGGGTATC
GAATTGGATA TGGATCAGGT GATGAAAGCA CACGAACTGT ATAAAAGCAT GGGATTAGGC
GCACGTAACG ACGCAATGGG AATGCAGTAC CTTATTCCTG AGTGGACGTT TGATAATAAA
CGTCCGTGTC TGGTTCGCTA A
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| Protein sequence | MTLQSSTPVI THMQVIPVAG HDSMLLNLSG AHAPYFTRNI VILKDNAGNT GVGEIPGGEK
IRQTLEDAAA LVVGKTLGEY KNVMTAVREQ FADRDSSGRG LQTFDLRTTI HVVTGIEAAM
LDLLGQFLNV SVASLLGDGQ QRDAVEMLGY LFYIGDRNKT DLPYQSQTNE KCDWYRLRHE
EALSPETIVR LAEAAYEKYG FNDFKLKGGV LAGSEEAEAV TALAKRFPQA RITLDPNGAW
SLDEAIGLGK QLRGVLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH
TISLQSVDIP LADPHFWTMQ GSVRVAQMCH EWGLTWGSHS NNHFDISLAM FTQVAAAAPG
KITAIDTHWI WQEGNQRLTK EPLQIVGGMV EVPKKPGLGI ELDMDQVMKA HELYKSMGLG
ARNDAMGMQY LIPEWTFDNK RPCLVR
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