Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3394 |
Symbol | |
ID | 8134374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3832372 |
End bp | 3833142 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866695 |
Product | alpha-dehydro-beta-deoxy-D-glucarate aldolase |
Protein accession | YP_003018946 |
Protein GI | 253689756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | [TIGR03239] 2-dehydro-3-deoxyglucarate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACTC CGCTGTTACC TAACCGTTTT CGCCAAGATT TGCAGCAGGG GAAAACGTTG ATTGGCTGCT GGTGTGCACT GGGCAACCCG ATGTCAACTG AAGTGCTGGG ACTGGCGGGA TTCGACTGGC TGGTGCTGGA TGGCGAGCAT GCGCCTAACG ATATCGTGAC GTTTATTCCT CAACTGATGG CGCTGAAAGG CAGCCACAGC GCGCCCGTCG TCCGTCCGCC GTGCAATGAG CCGATCATCA TCAAGCGGCT GTTGGATATT GGGTTCAATA ACTTCCTCAT TCCCTTTGTG GAAACGGCGG AAGAAGCTGC GCGTGCGGTT GCGTCAACGC GTTATCCGCC TGCGGGTATC CGCGGTGTTT CTGTGGCGCA CCGTAGCAAC TGCTACGGCA CCGAACCGGA CTATTTCGCC AAGATTAACG ACAGTATTAC CGTCGTGGTG CAAATCGAAA GCCAGGACGG CCTCGATAAT CTGGATGCGA TTATCGCGGT AGACGGCGTA GACGGCGTGT TTGTCGGCCC GAGCGATCTG TCTGCGGCGC TGGGCTATCT CGGTCAGCCT AATCACCCTG ACGTGCAGAA AGCGATCCGC CACATCTTCG ATCGCGCGGC AGCGCATAAC AAGCCGTGCG GCATTCTGGC ACCCGTTGAA GCCGATGCCC GCCGTTATCT GGAATGGGGT GCAAGCTTTG TCGCGGTCGG GAGCGATCTG GGCGTGTTCC GCAGCGCAAC TCAGGCGCTG AGCGACAAAT ACAAGAAGTG A
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Protein sequence | MKTPLLPNRF RQDLQQGKTL IGCWCALGNP MSTEVLGLAG FDWLVLDGEH APNDIVTFIP QLMALKGSHS APVVRPPCNE PIIIKRLLDI GFNNFLIPFV ETAEEAARAV ASTRYPPAGI RGVSVAHRSN CYGTEPDYFA KINDSITVVV QIESQDGLDN LDAIIAVDGV DGVFVGPSDL SAALGYLGQP NHPDVQKAIR HIFDRAAAHN KPCGILAPVE ADARRYLEWG ASFVAVGSDL GVFRSATQAL SDKYKK
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