Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3391 |
Symbol | |
ID | 8134371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3827171 |
End bp | 3829966 |
Gene Length | 2796 bp |
Protein Length | 931 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866692 |
Product | hybrid sensory histidine kinase BarA |
Protein accession | YP_003018943 |
Protein GI | 253689753 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAT ACAGTCTTCG TGCACGGATG TTGATACTGA TTTTGGCACC GACGCTGATG ATCGGGCTGC TGCTCAGTTC GTTCTTCGTT ATCCATCGTT ACAATCAGTT GCAGTCGCAG TTGGCTGATT CGGGCACCAG CATCATTGAA CCGCTGGCGA CCATCAGCGC TTACGCCATT ACCCATCGTC AGATGGACAC GATTCCCGCG TTAATCAATA CGCTGCATCG TCGGCACTCC ACGATTATTC GTACCATTAG CGTGTTCGAT GCGCGCAATC AGCTATTGGC TACCACCAAC GTACGCAACA ACGTGACATT GCAACCACTC AGCAGCGATG CGCCTTCCTA CAATAAACTG CACCTGCACC ACACGAATGA CGCGCTGATT CTGCATATGC CGATCGTCAA TGACAGCGAA TTTATGCCAA GTGGGACGCC GCCGGTGTTG CCCAGCACCG CCACGCCTCT CGGCTATCTG GTGATCGAAC TGGACACCAG CGCTATTCGG CTTCAACAGT ATCAGGAAAT ATTCATCGCC ACGCTCTTGC TGCTGCTATC GTTGGGTGCC GCCGTCCTCT TTGCCTATCG TCTGATGCGG GATGTCACCA CCCCGATTCG TAATATGGTT GATACCGTCG ATCGCATTCG CCGTGGGCAG TTGGATAGCC GCGTAGAAGG ATACATGCTG GGCGAGTTGG ATATGTTGAA AAACGGCATC AACTCAATGG CGATGTCGCT GACCGCCTAC CACGAAGAGA TGCAGCAAAA TATCGATCAG GCGACCTACG ATCTGCGCGA AACGCTGGAG CAGATGGAGA TCCAGAACGT CGAACTGGAT CTGGCCAAAA AGCGGGCGCA GGAGGCAGCA CGCATCAAAT CAGAGTTTCT GGCCAATATG TCACACGAAC TGAGGACGCC GCTGAATGGC GTGATCGGTT TCACGCGCCA GACGTTGAAG ACTCCGTTGA ACACCACACA GACTGACTAT CTGCTTACCA TCGAACGCTC CGCCAATAAC CTGCTGAATA TCATTAACGA CGTGCTGGAT TTTTCGAAAC TGGAAGCCGG AAAATTGGTG CTGGAGGATA TTCCGTTCTC GCTACACAAC GCGCTGGACG ATGTTGTGAT GCTGTTGGCG CACACGGCAC ATGAAAAAGG ATTGGAGCTG ACGCTCAGTA TTCAGAATGA CGTGCCCGAG CAGTTTGTCG GCGATCCGCT ACGGATACAG CAAATCATCA CCAACCTGCT GGGCAACGCG ATTAAATTTA CCGAGCAAGG CAACATTGAT ATTCGGGTAG AGAAGCGTCG GCAGGAACAT CATCAGGTCC AGCTCGAGGT GCAAATACGC GATACCGGTA TCGGCATTGC CGAGTTGCAG CAATCTCAAC TGTTCCAGGC GTTCCGTCAG GCTGACACCA GTATTTCACG CCGTCATGGT GGCACGGGGC TTGGGCTGGT CATCACCCAA CGTTTGGTCA AAGAGATGGG CGGCGATATC AGCTTCCAGA GCCAGCTCAA CAAGGGATCG ACCTTCTGGT TCCATATCAC GCTGCCACTC AACCCTCACG CCATACCGAC AGAACCGGCC TACACGATGC TGCAAGGCAA ACATCTGGCC TACGTCGAAT ACCATCCCAT CGCCGCGCAA GCTACGCTGG ATATCCTGAG CCAAACACCG CTCATCGTGA GCTACAGCCC GACGTTTGAG CAACTGCCGG AAGGGGAATT CGATATCCTG CTGCTCGGCG TTCCCGTGCA ATATCGCAAC ACACTGCTCG ACTACACGCC CAGACTGCGC GACATCTGCC GCCGCGCGCC CTGCGTGATT CTGGCGCTGC CCAGCCTGGC GCAAATGGAT GCCGAACAGT TGAAAACCTT CGGCGTACAT GCCTGTCTGA GCAAACCACT CGCCGCACCG CGCCTGCTGC CACTGTTACA GGACAGCACG CTGTTCCAGC TCTCTTTCCT GCCGGATGAG ACGGTGTCTC ACCCGAGTGC CATACGCCAT CCAGCTCGTC TGCCACTGAG CGTGATGGCG GTGGATGATA ATCCGGCTAA TCTGAAACTG ATCGGCACGC TGCTGGAAGA GCAGGTCGAG ACGATTATCC TGTGCGAAAG TGGTCAGGAT GCGATTGCAC AGGCGAAACT GCATCAGTTC GATATCATCC TCATGGATAT TCAGATGCCG GGTATGGACG GCATTTGCGC CAGCGAGCTG ATCCGTCAGA TCCCTCATCA TGCCACTACG CCTATCATCG CGGTGACGGC GCAAACCATG ACGGGTGAAC GTGAACATTT GCTACGTTCA GGTATGGATG ACTATCTGGC TAAACCGATA GACGAACAGA TGCTGAAAAG CGTGCTAACG CGCCATGCGC GGAAGGATCC GCTGAAGCGC GAACGGGGCG ATATAACGGG ATTATTGAGC GAGCATGACG ATAGTCATCT GTCTCTCGAC TGGGCGCTGG CGCAACAACA GGCGGCCAAC AAGCCTGAAT TGGCGCGTGA CTTGCTGCAA ATGCTGTTGG ATTTCTTGCC GGAGGTTCAG CAGAAGATAG AAAACGTCCT GAAGGGTCAG ACGGATGACG ACATTATCGA ACTGATTCAT AAACTGCACG GCAGTTGTAG CTACAGCGGC GTTCCGCGTC TGAAACGCAT TTGCCGCTAT CTGGAGCAGC AGTTGCGTAA AGGCGTTCAC GCCAGCGATT TGGAACCCGA ATGGCTGGAA CTACTGGACG AAATCGACAA CGTCAACAAA GCCGCTCAGC CGCATATCAA GCCGCTACTT CCGTAA
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Protein sequence | MTKYSLRARM LILILAPTLM IGLLLSSFFV IHRYNQLQSQ LADSGTSIIE PLATISAYAI THRQMDTIPA LINTLHRRHS TIIRTISVFD ARNQLLATTN VRNNVTLQPL SSDAPSYNKL HLHHTNDALI LHMPIVNDSE FMPSGTPPVL PSTATPLGYL VIELDTSAIR LQQYQEIFIA TLLLLLSLGA AVLFAYRLMR DVTTPIRNMV DTVDRIRRGQ LDSRVEGYML GELDMLKNGI NSMAMSLTAY HEEMQQNIDQ ATYDLRETLE QMEIQNVELD LAKKRAQEAA RIKSEFLANM SHELRTPLNG VIGFTRQTLK TPLNTTQTDY LLTIERSANN LLNIINDVLD FSKLEAGKLV LEDIPFSLHN ALDDVVMLLA HTAHEKGLEL TLSIQNDVPE QFVGDPLRIQ QIITNLLGNA IKFTEQGNID IRVEKRRQEH HQVQLEVQIR DTGIGIAELQ QSQLFQAFRQ ADTSISRRHG GTGLGLVITQ RLVKEMGGDI SFQSQLNKGS TFWFHITLPL NPHAIPTEPA YTMLQGKHLA YVEYHPIAAQ ATLDILSQTP LIVSYSPTFE QLPEGEFDIL LLGVPVQYRN TLLDYTPRLR DICRRAPCVI LALPSLAQMD AEQLKTFGVH ACLSKPLAAP RLLPLLQDST LFQLSFLPDE TVSHPSAIRH PARLPLSVMA VDDNPANLKL IGTLLEEQVE TIILCESGQD AIAQAKLHQF DIILMDIQMP GMDGICASEL IRQIPHHATT PIIAVTAQTM TGEREHLLRS GMDDYLAKPI DEQMLKSVLT RHARKDPLKR ERGDITGLLS EHDDSHLSLD WALAQQQAAN KPELARDLLQ MLLDFLPEVQ QKIENVLKGQ TDDDIIELIH KLHGSCSYSG VPRLKRICRY LEQQLRKGVH ASDLEPEWLE LLDEIDNVNK AAQPHIKPLL P
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