| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3385 |
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| Symbol | |
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| ID | 8134365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3816201 |
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| End bp | 3818393 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866686 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003018937 |
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| Protein GI | 253689747 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCC GAAAAAATAA TAGAAAAAAA GCACAGTGGT TATTGCCAGC ATTAATGGTG
GTTGTTCCAC CTGTATTGAG CGCCGAACCG ATAACGAGTA AAGACAGCGA AAAGGCAAAA
GCGGCTGACG TTATGGTCGT TAAGGCAGGG CGCAGTGAGG AGAATGCGAA TCTGGCTGGT
GCAGGGATGA CGACCGATGA TGTGGAGATC GGGCCATTAG GTAAACGTTC AAGACTGGAT
ACGCCGTATT CGACCACGAC TGTAACGGAA GCCATGATTG ACAATCAGCA GGCAAAAAAT
GTTAACGATC TTCTGAAATA CAGCGCGTCC AGCCAGATGC AGGCGCGGGG CGGTATTGAC
GTAGGCCGTC CGCAAAGTCG TGGTATGCAA GGCGACGTGC TGGCGAACAG CCGACTGGAT
GGGTTAAACA TTATTTCCAC TACCGCCTTT CCGGTTGAGA TGTTGGAGCG ATTGGATGTC
ATTAATAGCC TGACTGGCGC ACTGTATGGA CCAGCCAGCC CTGCCGGACA GTTTAACTTC
ACGCAGAAAA GGCCAACGGC GCAGACGTTA AACCGTTTTA CCGTAGGCTA TTCCGGTAAA
GGTGCCGCGA TGGGGCATGC TGATTTGGGC GGACATGTGG GGGACGAAAA TCAGTTCGGC
TATCGCATCA ACCTGTTACA GGATGAGGGC GAAGGAAGTA CCAGCAACAG CACGCTGAGG
CGTCAATTAG CCAGCGTCGC CTTTGACTGG AACCTCTCGC CCGATACGGT GTTGGAAGTT
AACGCCAGCG AGTACCGCTT CCGCAAAATG GGCTATGCCA GTGGGTTTTC CTATGGACCG
ACGATTCAGC TACCCAGCGC GCCGGATATT ACGAAACAGG GATACGGGCA AAGCTTTGCG
GGTCTCGATC TGATAACAAA AACGGCCAGC ACCCGCCTGA AACACTACTT TAATAATAAC
TGGTATGCCT CGGGTGGTGT GGGTTATCAA ACCGCCGATC GTGGCATGCG TTCACTATCG
CATTCTATTA CCAACAATCA GGGCGCAGTG AGCACTTCTC TGACGCAACC CTACAGTGCC
GGGCGCTTTA AGGTACTGAG CAATACGCTG CAACTGAACG GCCATATTGA TACGAACGGG
CCTTCCCATG ATGTGGTCTT CAGTACCACC GGATACCAGT GGACGATCTA TAGCGGGCTG
GGGAATGGCA AGCGCTTTCC GTTGGGAAGT AGCACCATTG ATTCACCACG TAATTACGCC
GGTCCCAGCG ATGGGCGTTT TTATCTGGGA TCGGGTCGTT ATAAATCCAG CCGCACCAGC
CAGCAGGCTA TCACGGCGGG TGATACCATC ACGTTCAACG ATCGCTGGTC GGCGATGGGC
GTAGTGAGTC AAAGCTGGCT TACCTCACGC AGTTTTGGCT CTGATGGTGG CGTGACCCGT
GATACCGGCA CCAGCCCGAC AGTGTCATTG ATGTACAAAC CGTTGCCTAA CGTGATGACC
TATGTCGCCT ATGCCGATTC GCTGGAGCAG GGCGGCACTG CGCCAACGGA TGACTATGTG
GTGAATAAAG GGCAGACGTT GAAGCCTTAC CGCAGTACCC AGTATGAAGC GGGGGTGAAA
TCACAGTGGG ATGGGTTGAA TCTGAACGCG GCCATTTTCC GTCTGGAACG CCCTTTTGCC
TATGTTGCGT CAGATAACGT TTTCAGGGAG CAAGGTAATC AGGTTAATAC CGGGCTGGAG
CTGATGGCGG ATGGTGAAGT GCTTTCCGGC TTGCATGTCT ATGCCAGCAC AACGCTGCTG
GATCCGAAAC TGACTGACAC AGGGATCGCA GCAACGACGA ATAAACGGGT GGTCGGGGTG
CCGAAGTTGC AGGCCAACCT ACTGACGGAA TATAGCCACC CGTCTTACCC CAATATGGTC
TATATCGCGA ACCTCCACTA CACCGGTAAG CGTGCAGCCA ATGATACCAA TACGACGTGG
GCGGATAGCT ATGTCACGCT GGACTTGGGC ACACGCTACG GCTTTAAGTT GTACGATAAG
CCTGCGGCGT TTCGCGTTGC ACTCAATAAT GTCACCAATG AGCGTTACTG GGCTTCTATT
TTCCCCGGCA GCACAGATGG CATTAACGGC GGTGCCAACG CTTTCGTCGG CGATCCGCGT
GAAATTCGCG CTTCTTTGAC CGTTGACTGG TGA
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| Protein sequence | MKARKNNRKK AQWLLPALMV VVPPVLSAEP ITSKDSEKAK AADVMVVKAG RSEENANLAG
AGMTTDDVEI GPLGKRSRLD TPYSTTTVTE AMIDNQQAKN VNDLLKYSAS SQMQARGGID
VGRPQSRGMQ GDVLANSRLD GLNIISTTAF PVEMLERLDV INSLTGALYG PASPAGQFNF
TQKRPTAQTL NRFTVGYSGK GAAMGHADLG GHVGDENQFG YRINLLQDEG EGSTSNSTLR
RQLASVAFDW NLSPDTVLEV NASEYRFRKM GYASGFSYGP TIQLPSAPDI TKQGYGQSFA
GLDLITKTAS TRLKHYFNNN WYASGGVGYQ TADRGMRSLS HSITNNQGAV STSLTQPYSA
GRFKVLSNTL QLNGHIDTNG PSHDVVFSTT GYQWTIYSGL GNGKRFPLGS STIDSPRNYA
GPSDGRFYLG SGRYKSSRTS QQAITAGDTI TFNDRWSAMG VVSQSWLTSR SFGSDGGVTR
DTGTSPTVSL MYKPLPNVMT YVAYADSLEQ GGTAPTDDYV VNKGQTLKPY RSTQYEAGVK
SQWDGLNLNA AIFRLERPFA YVASDNVFRE QGNQVNTGLE LMADGEVLSG LHVYASTTLL
DPKLTDTGIA ATTNKRVVGV PKLQANLLTE YSHPSYPNMV YIANLHYTGK RAANDTNTTW
ADSYVTLDLG TRYGFKLYDK PAAFRVALNN VTNERYWASI FPGSTDGING GANAFVGDPR
EIRASLTVDW
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