Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3384 |
Symbol | |
ID | 8134364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3815119 |
End bp | 3816195 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866685 |
Product | periplasmic binding protein |
Protein accession | YP_003018936 |
Protein GI | 253689746 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAC GTAACCTTAC CACGCGCTAT CGCGAGTATT TACTCAATGC GTTAGTGCTG CTTGCGGTGA GTTTCTCCGG CGTGCACCAG GTTCAGGCGG AAACGCCTGA ACCTGCGCAG CGGACGATTC ACTATTACGG CGATCGCACG GTGACGGTGC CTGCGACGGT TGAGCGGGTG GCTACCTCGT GGAATGCGCA AAACTCGATA TTGGCTATGC TCGGCTATGG CGATCGTATT GTCGGAACGA CGAAGCTGGT ACGCGATATG CCGCTGTTCC GCCAGTTTGT GCCATCCATT ACGCAGGCTT CTCTGGTTTC CCAGAGCGGA AGCATGGGAA TTAATACTGA GGCGCTGATC GCACGCCGTG CTCAGGTCTT TTTCGTGTCG GACAGCGTGC CGGTTGCGGA AGCCGAGGCG CTGAATAAAG CCGGTATTGC CATCGTACCG CTTCGCTACA ACTCGCTGGC AGCGATGGTC GAACGCACGC TAATTACCGG TGAGATTCTG GGACCGGAAG CATCGCGTCG GGCACAGGAT TTCGCCGCCT ACTATCAGGA CAACGTCAGG CGCGTGTCGG AGGTTGTCCA GCGCATTCCG CCGCAGCAGC GTGTAAAGGT CTACCATGCG GTTGGCGATC CGCTAACCAC ATCGGGACGA CCTTCACTGA ATCAGGACTG GATGGATCTG GGCGGCGCGA TCAACGTGGC GGAACCGTGG TTTAGCCGTG CTGGAGTGAC AACCGCGCCC GTATCGCTCG AGCAGGTTTT TCAGGCCGAT CCTGATGTGA TTATTACGAT GCGGGCTGAG GATGCGAAGG CGATCCGTCA GGATGCGCAG TGGCAGCAGC TACGTGCAGT AAAACAGGGG CGGGTTTATG CGAATCCGCT GGGCATGTTC TGGTGGTGCC GGGAAACGTC GGAGCAGGCG CTGCAATTTC TTTGGCTGGC AAAAACGCTG TATCCACAGC AGATGCAGCA CATTGATATG GCAAAAGAGA CGCATGATTT TTATCAGCGT TTTTACGGTA TCGATTTAAC CGCGCAGCAG GTGGATTCAA TTTTGTCTCC ACCTTAA
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Protein sequence | MQKRNLTTRY REYLLNALVL LAVSFSGVHQ VQAETPEPAQ RTIHYYGDRT VTVPATVERV ATSWNAQNSI LAMLGYGDRI VGTTKLVRDM PLFRQFVPSI TQASLVSQSG SMGINTEALI ARRAQVFFVS DSVPVAEAEA LNKAGIAIVP LRYNSLAAMV ERTLITGEIL GPEASRRAQD FAAYYQDNVR RVSEVVQRIP PQQRVKVYHA VGDPLTTSGR PSLNQDWMDL GGAINVAEPW FSRAGVTTAP VSLEQVFQAD PDVIITMRAE DAKAIRQDAQ WQQLRAVKQG RVYANPLGMF WWCRETSEQA LQFLWLAKTL YPQQMQHIDM AKETHDFYQR FYGIDLTAQQ VDSILSPP
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