| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3382 |
|---|
| Symbol | |
|---|
| ID | 8134362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 3812893 |
|---|
| End bp | 3814311 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644866683 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003018934 |
|---|
| Protein GI | 253689744 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAC AACAATCCAA AAAGGATTTA CAAGCTATCC TGAATACGAT GAAGCGTGCT
CACATTGCAT CTGGCCCTGC CGATGCCGCA CGGCGTAAAG ATCGCTTACA GCGCAGCATC
AATCTTATCC GCGAAAACCA CGTGGCGCTC GCACAGGCCA TGAGCGAAGA TTTCGGCCAT
CGCAGCCTGT ATCACTCCTT CGCCGCTGAT GTCGGCACCA CCTTGAAGAT GCTACAGAAC
GCCATCGACA ACGTTGAACG CTGGATGCAG CCAGAGCTGG TTGATGAACC CGCTCCCGGC
ATGCAGGCGT GGATTCAGCA TCAGCCTCTG GGCGTGATCG GCGTGATCAG CCCGTGGAAC
TTTCCGGTGA ACCTGTCATT TGGCCCGCTG GCTGACATTT TTGCTGCCGG TAATACCGCG
ATTCTGAAGC CGTCAGAACT CACACCGCGT ACGTCTGAAC TGCTGGCGGA ACTGATTGCC
CACTATTTCG ACCCGCTGGA ATTGGCTGTG GTACTGGGCG ATGCGGAAAT CGGTCAGGCA
TTCAGCGAGC TGCCGTTCGA TCATCTGGTC TTCACCGGCA GCACTGCCGT GGGGAAACAC
GTGATGCGTG CGGCGGCAGA GAATCTGGTG CCGGTCACGC TAGAATTGGG TGGAAAATCA
CCAGTCGTGA TCGATAGCAG CGCAGATATC ACCGAAGCCG TGGAGCGCAC GCTGACGGTG
AAAACCTTCA ACGCTGGGCA AATCTGCCTG TCGCCGGACT ATGTTCTGCT GCCCGAAGGC
CAGGAGCAGG CCTTCCGCGA TGCCGCGAAA GCCTTTATGC AGAAAAGCTT CCCAACGCTA
CAGGCGAACC CGGATTACAC GTCTATCATT GCTGACAGGC ATTACGATCG CCTGATTCGA
CTCCTGAAAG AAGCCGAGCA GCAAGGCGCA ACCGTCGTCA GTCTGGCACC GGAAGGCGAA
GCCCCCTACG ATGCTAAAAG CCGCAAAATT GCACCGCATC TCGTGTTCGG CGTCCATGAC
GATATGACGA TCATGCAGGA AGAAATTTTT GGCCCGCTGC TGCCGGTTAA AACCTATCAG
ACAGCAGAAG AACCGATTAC CTATATCAAC GCGCATCCAC GTCCGCTGGC AGCGTATCTG
TTCAGCCATG ATGACGCCAT GCAGCAGCGC TTCGCTGCCA GAACGACATC CGGTGCGCTG
GTCATCAACG ATGTGATGAC ACACGTTTCT ATCGACACGC TCCCATTCGG CGGCGTTGGC
GCATCCGGCA TCGGCGCATA CCACGGCGTC CACGGATTCC GCCGTTTCAG CCACGCTAAA
CCGATTGTCA TACAGAGTGA GGATGGCGCG TCTAACCTGA CGTTGCGTGC ACCTTACCAT
GAGAAACAAG ACGCGATTGT CGCTGCCCTC AAAGGGTAA
|
|---|
| Protein sequence | MSTQQSKKDL QAILNTMKRA HIASGPADAA RRKDRLQRSI NLIRENHVAL AQAMSEDFGH
RSLYHSFAAD VGTTLKMLQN AIDNVERWMQ PELVDEPAPG MQAWIQHQPL GVIGVISPWN
FPVNLSFGPL ADIFAAGNTA ILKPSELTPR TSELLAELIA HYFDPLELAV VLGDAEIGQA
FSELPFDHLV FTGSTAVGKH VMRAAAENLV PVTLELGGKS PVVIDSSADI TEAVERTLTV
KTFNAGQICL SPDYVLLPEG QEQAFRDAAK AFMQKSFPTL QANPDYTSII ADRHYDRLIR
LLKEAEQQGA TVVSLAPEGE APYDAKSRKI APHLVFGVHD DMTIMQEEIF GPLLPVKTYQ
TAEEPITYIN AHPRPLAAYL FSHDDAMQQR FAARTTSGAL VINDVMTHVS IDTLPFGGVG
ASGIGAYHGV HGFRRFSHAK PIVIQSEDGA SNLTLRAPYH EKQDAIVAAL KG
|
|---|
| |