| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3379 |
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| Symbol | |
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| ID | 8134359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3808662 |
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| End bp | 3809801 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866680 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003018931 |
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| Protein GI | 253689741 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTAT TCAGTGTAAA ACATAGCCCG CTTTTACGTC AGCCGGAACG CTTCATCTCC
CGTGAAGGTC TGAAGGCGCT GATTTGCCGT ATCACCGACA ATCTGGTGAA TATTGAGGAT
AAAACCGGTG AGTTCTTGTT ACGGCTGGAC GATGGTCGGG TGATTGATAC CAAAGGCTGG
GCGGGATGGG AATGGACGCA CGGCATCGGG CTGTACGGGA TTTACCAGTA TTATCAGCAG
ACGGGTGACG AGCAGATGCG TGCCATCATC GACGACTGGT TTACTGAGCG TCTGGCTGAA
GGTACGCCGA CGAAGAACGT GAACACCGTA TGTCCGTTCC TGACGCTGGC TTATCGCTAT
GAAGAAACGG GCGACGCGCG CTGGCGGCCG TATCTGGAGC GCTGGGCGGA GTGGGTGATG
TATGAAATGC CGCGCACGGA CAAGCAGGGT TTGCAGCACA TTGTTTATAA CAATGAAAAC
CACCAGCAGC TGTGGGATGA CACGCTGATG ATGAGCGTGC TGCCGCTGGC GAAAATCGGC
AAGCTGTTAA ACCGGCCGGA GTTTGTGGAA GAAGCCACGT ATCAGTTCTT GCTACACGTG
CAATACCTGA TGGATCGTGA AAGCGGCCTG TGGTTCCACG GCTGGACGTT TGAAGGGCAG
CACAACTATG CCAAAGCGCG CTGGGCCCGA GGTAACAGCT GGCTGACGAT CGTGATTCCT
GAGTTTATCG AACTGCTGGA TCTCCCGGAG CATAACGCGA CACGCCGCTT CCTGTTGCAG
GTGTTGGAAA GCCAGATTGA AGCATTGGCG AAATATCAGG ATGACAGTGG CCTGTGGCAC
ACGCTGATTG ACGATCCAAA CTCGTACCTC GAAAGCTCGG CAACCGCCGG TTTTGCCTAC
GGTATTTTGA AAGCGGTGCG CAAGCGCTAT GTCGATCCGA GCTACGCTGA AGTGGCGGAG
AAAGCGATTC GCGGCGTGAT TAATCACGTT AATGAGGACG GCGAGCTGAC ACAGGTATCA
TTTGGTACTG CGATGGGCAA CGATCTGGAT TTCTACCGCA ACATCGCGCT GACCTCCATG
CCGTACGGCC AGGCAATGGC GATCCTGTGT CTGGCGGAAT ACCTGCGGGT ATATCTGTAA
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| Protein sequence | MTVFSVKHSP LLRQPERFIS REGLKALICR ITDNLVNIED KTGEFLLRLD DGRVIDTKGW
AGWEWTHGIG LYGIYQYYQQ TGDEQMRAII DDWFTERLAE GTPTKNVNTV CPFLTLAYRY
EETGDARWRP YLERWAEWVM YEMPRTDKQG LQHIVYNNEN HQQLWDDTLM MSVLPLAKIG
KLLNRPEFVE EATYQFLLHV QYLMDRESGL WFHGWTFEGQ HNYAKARWAR GNSWLTIVIP
EFIELLDLPE HNATRRFLLQ VLESQIEALA KYQDDSGLWH TLIDDPNSYL ESSATAGFAY
GILKAVRKRY VDPSYAEVAE KAIRGVINHV NEDGELTQVS FGTAMGNDLD FYRNIALTSM
PYGQAMAILC LAEYLRVYL
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