Gene PC1_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3372 
Symbol 
ID8134352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3803191 
End bp3803553 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content54% 
IMG OID644866673 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_003018924 
Protein GI253689734 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTA CGCTATTTAA AGATTTTCAG TTTGAAGCCG CGCATCATTT GCCCCACGTA 
CCGGAAGGCC ACAAATGCGG GCGGCTGCAT GGGCACTCTT TCATGGTGAG ACTGGAAATT 
ACCGGTGAAG TGGATCCGCA TACCGGCTGG GTGATGGATT TCTCTGAGCT GAAAGCCGCG 
TTCAAACCTA CGTGGGAGCG GTTGGATCAC CACTATCTGA ATGAGATCCC TGGACTGGAA 
AACCCAACCA GCGAGGTGCT GGCGCACTGG ATCTGGCACC AGTTGAAGCC GACATTACCG 
CTGCTCAGCG CCGTGATGGT GAAAGAAACC TGCACCGCGG GCTGCGTCTA TAAAGGCGAG 
TAA
 
Protein sequence
MVTTLFKDFQ FEAAHHLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW VMDFSELKAA 
FKPTWERLDH HYLNEIPGLE NPTSEVLAHW IWHQLKPTLP LLSAVMVKET CTAGCVYKGE